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6DMI

A multiconformer ligand model of 5T5 bound to BACE-1

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue NA A 501
ChainResidue
AHIS242
ATYR245
AHOH699
AHOH720

site_idAC2
Number of Residues3
Detailsbinding site for residue DMS A 502
ChainResidue
AARG157
AASN159
AGLU195

site_idAC3
Number of Residues6
Detailsbinding site for residue NA A 503
ChainResidue
AHOH694
AHOH754
AHOH875
AHOH886
AVAL202
ATHR205

site_idAC4
Number of Residues27
Detailsbinding site for residue 5T5 A 504
ChainResidue
AGLY72
AGLN73
AGLY74
ALEU91
AASP93
AGLY95
ASER96
AASN98
AVAL130
ATYR132
ATRP137
AILE171
ATRP176
AILE179
AARG189
AASP289
ASER290
AGLY291
ATHR292
ATHR293
AHOH650
AHOH670
AHOH675
AHOH687
AHOH768
AHOH769
AHOH842

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE90-VAL101

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"17425515","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19011241","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245011

PDB entries from 2025-11-19

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