6DLI
Crystal structure of glutamate racemase from Thermus thermophilus in complex with Beta-chloro-D-alanine
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008360 | biological_process | regulation of cell shape |
| A | 0008881 | molecular_function | glutamate racemase activity |
| A | 0009252 | biological_process | peptidoglycan biosynthetic process |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0016855 | molecular_function | racemase and epimerase activity, acting on amino acids and derivatives |
| A | 0036361 | molecular_function | racemase activity, acting on amino acids and derivatives |
| A | 0071555 | biological_process | cell wall organization |
| B | 0008360 | biological_process | regulation of cell shape |
| B | 0008881 | molecular_function | glutamate racemase activity |
| B | 0009252 | biological_process | peptidoglycan biosynthetic process |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0016855 | molecular_function | racemase and epimerase activity, acting on amino acids and derivatives |
| B | 0036361 | molecular_function | racemase activity, acting on amino acids and derivatives |
| B | 0071555 | biological_process | cell wall organization |
| C | 0008360 | biological_process | regulation of cell shape |
| C | 0008881 | molecular_function | glutamate racemase activity |
| C | 0009252 | biological_process | peptidoglycan biosynthetic process |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0016855 | molecular_function | racemase and epimerase activity, acting on amino acids and derivatives |
| C | 0036361 | molecular_function | racemase activity, acting on amino acids and derivatives |
| C | 0071555 | biological_process | cell wall organization |
| D | 0008360 | biological_process | regulation of cell shape |
| D | 0008881 | molecular_function | glutamate racemase activity |
| D | 0009252 | biological_process | peptidoglycan biosynthetic process |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0016855 | molecular_function | racemase and epimerase activity, acting on amino acids and derivatives |
| D | 0036361 | molecular_function | racemase activity, acting on amino acids and derivatives |
| D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | binding site for residue C2N A 301 |
| Chain | Residue |
| A | ASP12 |
| A | SER13 |
| A | CYS75 |
| A | ASN76 |
| A | THR77 |
| A | THR116 |
| A | CYS176 |
| A | THR177 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 302 |
| Chain | Residue |
| A | TYR128 |
| A | ASP130 |
| A | ARG106 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | binding site for residue C2N B 301 |
| Chain | Residue |
| B | ASP12 |
| B | SER13 |
| B | TYR44 |
| B | CYS75 |
| B | ASN76 |
| B | THR77 |
| B | THR116 |
| B | CYS176 |
| B | THR177 |
| site_id | AC4 |
| Number of Residues | 10 |
| Details | binding site for residue C2N C 301 |
| Chain | Residue |
| C | ASP12 |
| C | SER13 |
| C | PRO43 |
| C | TYR44 |
| C | GLY45 |
| C | CYS75 |
| C | ASN76 |
| C | THR77 |
| C | THR116 |
| C | THR177 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | binding site for residue GOL C 302 |
| Chain | Residue |
| C | VAL68 |
| C | VAL92 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue C2N D 301 |
| Chain | Residue |
| D | ASP12 |
| D | SER13 |
| D | CYS75 |
| D | ASN76 |
| D | THR77 |
| D | THR116 |
| D | CYS176 |
| D | THR177 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue GOL D 302 |
| Chain | Residue |
| D | VAL68 |
| D | VAL92 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | ACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00258 |
| Chain | Residue | Details |
| A | CYS75 | |
| A | CYS176 | |
| B | CYS75 | |
| B | CYS176 | |
| C | CYS75 | |
| C | CYS176 | |
| D | CYS75 | |
| D | CYS176 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 16 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00258 |
| Chain | Residue | Details |
| A | ASP12 | |
| C | TYR44 | |
| C | ASN76 | |
| C | THR177 | |
| D | ASP12 | |
| D | TYR44 | |
| D | ASN76 | |
| D | THR177 | |
| A | TYR44 | |
| A | ASN76 | |
| A | THR177 | |
| B | ASP12 | |
| B | TYR44 | |
| B | ASN76 | |
| B | THR177 | |
| C | ASP12 |
