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6DKH

The crystal structure of L-idonate 5-dehydrogenase from Escherichia coli str. K-12 substr. MG1655

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0016491molecular_functionoxidoreductase activity
A0019521biological_processD-gluconate metabolic process
A0046183biological_processL-idonate catabolic process
A0046872molecular_functionmetal ion binding
A0050572molecular_functionL-idonate 5-dehydrogenase [NAD(P)+] activity
A0102198molecular_functionL-idonate 5-dehydrogenase (NAD+) activity
B0005515molecular_functionprotein binding
B0016491molecular_functionoxidoreductase activity
B0019521biological_processD-gluconate metabolic process
B0046183biological_processL-idonate catabolic process
B0046872molecular_functionmetal ion binding
B0050572molecular_functionL-idonate 5-dehydrogenase [NAD(P)+] activity
B0102198molecular_functionL-idonate 5-dehydrogenase (NAD+) activity
C0005515molecular_functionprotein binding
C0016491molecular_functionoxidoreductase activity
C0019521biological_processD-gluconate metabolic process
C0046183biological_processL-idonate catabolic process
C0046872molecular_functionmetal ion binding
C0050572molecular_functionL-idonate 5-dehydrogenase [NAD(P)+] activity
C0102198molecular_functionL-idonate 5-dehydrogenase (NAD+) activity
D0005515molecular_functionprotein binding
D0016491molecular_functionoxidoreductase activity
D0019521biological_processD-gluconate metabolic process
D0046183biological_processL-idonate catabolic process
D0046872molecular_functionmetal ion binding
D0050572molecular_functionL-idonate 5-dehydrogenase [NAD(P)+] activity
D0102198molecular_functionL-idonate 5-dehydrogenase (NAD+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS93
ACYS96
ACYS99
ACYS107

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BCYS93
BCYS96
BCYS99
BCYS107

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CCYS96
CCYS99
CCYS107
CCYS93

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN D 401
ChainResidue
DCYS93
DCYS96
DCYS99
DCYS107

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues28
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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