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6DGS

Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004152molecular_functiondihydroorotate dehydrogenase activity
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0006106biological_processfumarate metabolic process
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006222biological_processUMP biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
A0044205biological_process'de novo' UMP biosynthetic process
A0097014cellular_componentciliary plasm
A1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
B0000166molecular_functionnucleotide binding
B0004152molecular_functiondihydroorotate dehydrogenase activity
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0006106biological_processfumarate metabolic process
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006222biological_processUMP biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
B0044205biological_process'de novo' UMP biosynthetic process
B0097014cellular_componentciliary plasm
B1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
Functional Information from PDB Data
site_idAC1
Number of Residues25
Detailsbinding site for residue FMN A 401
ChainResidue
AALA19
ALYS165
AILE194
AASN195
ASER196
AGLY222
AGLY223
AVAL226
ACYS249
AGLY250
AGLY251
AALA20
AGLY272
ATHR273
AHOH525
AHOH535
AHOH542
AHOH592
AGLY21
AVAL22
ALYS44
ASER45
AASN68
AMET70
AASN128

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL A 402
ChainResidue
AVAL202
AILE203
ASO4403
AHOH511
BLEU227
BLEU231
BHOH573

site_idAC3
Number of Residues7
Detailsbinding site for residue SO4 A 403
ChainResidue
APRO63
AVAL202
AILE203
AASP204
AARG298
AGOL402
AHOH590

site_idAC4
Number of Residues24
Detailsbinding site for residue FMN B 401
ChainResidue
BALA19
BALA20
BGLY21
BLYS44
BSER45
BASN68
BMET70
BASN128
BLYS165
BILE194
BASN195
BSER196
BGLY222
BGLY223
BVAL226
BCYS249
BGLY250
BGLY251
BGLY272
BTHR273
BHOH507
BHOH511
BHOH542
BHOH600

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL B 402
ChainResidue
ALEU227
ALEU231
BVAL202
BILE203
BSO4403
BHOH517
BHOH580

site_idAC6
Number of Residues6
Detailsbinding site for residue SO4 B 403
ChainResidue
BLEU62
BPRO63
BASP204
BVAL211
BARG298
BGOL402

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PDB entries from 2024-05-01

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