6DA6
Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes, apo form at 2.6 A resolution (P212121)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0009056 | biological_process | catabolic process |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0033494 | biological_process | ferulate metabolic process |
A | 0046281 | biological_process | cinnamic acid catabolic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0009056 | biological_process | catabolic process |
B | 0016831 | molecular_function | carboxy-lyase activity |
B | 0033494 | biological_process | ferulate metabolic process |
B | 0046281 | biological_process | cinnamic acid catabolic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0009056 | biological_process | catabolic process |
C | 0016831 | molecular_function | carboxy-lyase activity |
C | 0033494 | biological_process | ferulate metabolic process |
C | 0046281 | biological_process | cinnamic acid catabolic process |
C | 0046872 | molecular_function | metal ion binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0009056 | biological_process | catabolic process |
D | 0016831 | molecular_function | carboxy-lyase activity |
D | 0033494 | biological_process | ferulate metabolic process |
D | 0046281 | biological_process | cinnamic acid catabolic process |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | binding site for residue MG A 501 |
Chain | Residue |
A | MET220 |
A | GLU228 |
A | HOH601 |
A | HOH625 |
A | HOH662 |
A | HOH664 |
A | HOH666 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue GOL A 502 |
Chain | Residue |
A | VAL314 |
A | HOH658 |
A | TYR41 |
A | GLU42 |
site_id | AC3 |
Number of Residues | 5 |
Details | binding site for residue GOL A 503 |
Chain | Residue |
A | ARG371 |
A | ARG416 |
A | SER418 |
A | HIS421 |
C | CYS436 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for residue GOL A 504 |
Chain | Residue |
A | TRP344 |
A | PRO346 |
A | PHE347 |
A | GLU348 |
A | SER404 |
A | HOH627 |
A | HOH638 |
A | HOH658 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue GOL A 505 |
Chain | Residue |
A | THR149 |
A | ARG169 |
A | SER219 |
A | SER308 |
A | ALA310 |
A | THR317 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue GOL A 506 |
Chain | Residue |
A | ASP87 |
A | SER89 |
A | THR91 |
A | GLU94 |
A | GOL507 |
site_id | AC7 |
Number of Residues | 8 |
Details | binding site for residue GOL A 507 |
Chain | Residue |
A | GLY74 |
A | SER75 |
A | PRO76 |
A | LEU77 |
A | SER89 |
A | GOL506 |
A | HOH605 |
A | HOH639 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue GOL B 501 |
Chain | Residue |
B | GLY74 |
B | SER75 |
B | PRO76 |
B | LEU77 |
B | SER89 |
B | ALA90 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue GOL B 502 |
Chain | Residue |
B | THR163 |
B | GLU227 |
B | VAL229 |
B | LEU251 |
B | HOH605 |
B | HOH613 |
site_id | AD1 |
Number of Residues | 3 |
Details | binding site for residue GOL B 503 |
Chain | Residue |
B | GLU348 |
B | SER404 |
B | HOH631 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue GOL B 504 |
Chain | Residue |
B | ARG416 |
B | SER418 |
B | HIS421 |
D | GLY435 |
D | CYS436 |
site_id | AD3 |
Number of Residues | 5 |
Details | binding site for residue GOL B 505 |
Chain | Residue |
B | THR149 |
B | SER219 |
B | SER308 |
B | THR317 |
B | TRP321 |
site_id | AD4 |
Number of Residues | 7 |
Details | binding site for residue MG B 506 |
Chain | Residue |
B | MET220 |
B | GLU228 |
B | HOH601 |
B | HOH633 |
B | HOH650 |
B | HOH655 |
B | HOH659 |
site_id | AD5 |
Number of Residues | 5 |
Details | binding site for residue GOL C 501 |
Chain | Residue |
C | TYR41 |
C | GLU42 |
C | ARG44 |
C | PRO313 |
C | VAL314 |
site_id | AD6 |
Number of Residues | 2 |
Details | binding site for residue GOL C 502 |
Chain | Residue |
C | ARG377 |
C | GLN380 |
site_id | AD7 |
Number of Residues | 7 |
Details | binding site for residue GOL C 503 |
Chain | Residue |
C | GLY74 |
C | SER75 |
C | PRO76 |
C | LEU77 |
C | SER89 |
C | ALA90 |
C | HOH607 |
site_id | AD8 |
Number of Residues | 2 |
Details | binding site for residue GOL C 504 |
Chain | Residue |
C | ARG169 |
C | ALA310 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue GOL D 501 |
Chain | Residue |
B | GLY435 |
B | TYR437 |
D | ARG371 |
D | ARG416 |
D | HIS421 |
D | LEU455 |
site_id | AE1 |
Number of Residues | 3 |
Details | binding site for residue MG D 503 |
Chain | Residue |
D | GLU228 |
D | ALA218 |
D | MET220 |