6D33

Crystal structure of BH1352 2-deoxyribose-5-phosphate from Bacillus halodurans

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004139	molecular_function	deoxyribose-phosphate aldolase activity
A	0005737	cellular_component	cytoplasm
A	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
A	0009264	biological_process	deoxyribonucleotide catabolic process
A	0016052	biological_process	carbohydrate catabolic process
A	0016829	molecular_function	lyase activity
A	0046386	biological_process	deoxyribose phosphate catabolic process
B	0004139	molecular_function	deoxyribose-phosphate aldolase activity
B	0005737	cellular_component	cytoplasm
B	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
B	0009264	biological_process	deoxyribonucleotide catabolic process
B	0016052	biological_process	carbohydrate catabolic process
B	0016829	molecular_function	lyase activity
B	0046386	biological_process	deoxyribose phosphate catabolic process
C	0004139	molecular_function	deoxyribose-phosphate aldolase activity
C	0005737	cellular_component	cytoplasm
C	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
C	0009264	biological_process	deoxyribonucleotide catabolic process
C	0016052	biological_process	carbohydrate catabolic process
C	0016829	molecular_function	lyase activity
C	0046386	biological_process	deoxyribose phosphate catabolic process
D	0004139	molecular_function	deoxyribose-phosphate aldolase activity
D	0005737	cellular_component	cytoplasm
D	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
D	0009264	biological_process	deoxyribonucleotide catabolic process
D	0016052	biological_process	carbohydrate catabolic process
D	0016829	molecular_function	lyase activity
D	0046386	biological_process	deoxyribose phosphate catabolic process
E	0004139	molecular_function	deoxyribose-phosphate aldolase activity
E	0005737	cellular_component	cytoplasm
E	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
E	0009264	biological_process	deoxyribonucleotide catabolic process
E	0016052	biological_process	carbohydrate catabolic process
E	0016829	molecular_function	lyase activity
E	0046386	biological_process	deoxyribose phosphate catabolic process
F	0004139	molecular_function	deoxyribose-phosphate aldolase activity
F	0005737	cellular_component	cytoplasm
F	0006018	biological_process	2-deoxyribose 1-phosphate catabolic process
F	0009264	biological_process	deoxyribonucleotide catabolic process
F	0016052	biological_process	carbohydrate catabolic process
F	0016829	molecular_function	lyase activity
F	0046386	biological_process	deoxyribose phosphate catabolic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue GOL A 301

Chain	Residue
A	GLN113
A	LYS148
C	VAL147
C	LYS148

---

site_id	AC2
Number of Residues	2
Details	binding site for residue GOL A 302

Chain	Residue
A	GLU144
A	VAL176

---

site_id	AC3
Number of Residues	5
Details	binding site for residue TRS B 301

Chain	Residue
E	VAL147
E	LYS148
B	GLN113
B	LYS148
B	GOL304

---

site_id	AC4
Number of Residues	2
Details	binding site for residue GOL B 302

Chain	Residue
B	ALA141
B	GLU144

---

site_id	AC5
Number of Residues	2
Details	binding site for residue GOL B 303

Chain	Residue
B	ASP191
B	ASP194

---

site_id	AC6
Number of Residues	4
Details	binding site for residue GOL B 304

Chain	Residue
B	VAL147
B	LYS148
B	TRS301
E	HOH408

---

site_id	AC7
Number of Residues	3
Details	binding site for residue GOL B 305

Chain	Residue
A	GLU20
B	GLN104
B	GOL306

---

site_id	AC8
Number of Residues	2
Details	binding site for residue GOL B 306

Chain	Residue
B	ASP102
B	GOL305

---

site_id	AC9
Number of Residues	13
Details	binding site for residue TRS C 301

Chain	Residue
A	GLY150
A	ALA151
A	ASP152
A	ASN180
A	LEU181
A	HOH430
C	GLY150
C	ALA151
C	ASP152
C	ASN180
C	HOH402
C	HOH405
C	HOH410

---

site_id	AD1
Number of Residues	2
Details	binding site for residue GOL C 302

Chain	Residue
C	GLN113
C	GLU120

---

site_id	AD2
Number of Residues	14
Details	binding site for residue TRS D 301

Chain	Residue
D	GLY150
D	ALA151
D	ASP152
D	ASN180
D	HOH403
D	HOH408
D	HOH416
D	HOH426
F	GLY150
F	ALA151
F	ASP152
F	ASN180
F	LEU181
F	HOH415

---

site_id	AD3
Number of Residues	6
Details	binding site for residue GOL D 302

Chain	Residue
D	GLN113
D	GLU120
D	LYS148
D	ALA149
D	GOL303
F	LYS148

---

site_id	AD4
Number of Residues	5
Details	binding site for residue GOL D 303

Chain	Residue
D	VAL147
D	LYS148
D	GOL302
F	GLU120
F	LYS148

---

site_id	AD5
Number of Residues	11
Details	binding site for residue TRS E 301

Chain	Residue
B	GLY150
B	ALA151
B	ASP152
B	ASN180
E	GLY150
E	ALA151
E	ASP152
E	ASN180
E	HOH405
E	HOH406
E	HOH407

---

site_id	AD6
Number of Residues	4
Details	binding site for residue GOL E 302

Chain	Residue
E	GLU32
E	GLN104
E	GOL303
F	GLU20

---

site_id	AD7
Number of Residues	2
Details	binding site for residue GOL E 303

Chain	Residue
E	GOL302
F	GLU20

---

site_id	AD8
Number of Residues	1
Details	binding site for residue GOL E 304

Chain	Residue
E	GLU144

---

site_id	AD9
Number of Residues	2
Details	binding site for residue GOL F 301

Chain	Residue
F	TYR105
F	GLU144

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	12
Details	Active site: {"description":"Proton donor/acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_00114","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	6
Details	Active site: {"description":"Schiff-base intermediate with acetaldehyde","evidences":[{"source":"HAMAP-Rule","id":"MF_00114","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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