6CGR
CryoEM structure of herpes simplex virus 1 capsid with associated tegument protein complexes.
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 0 | 0016032 | biological_process | viral process |
| 0 | 0019028 | cellular_component | viral capsid |
| 0 | 0042025 | cellular_component | host cell nucleus |
| 1 | 0016032 | biological_process | viral process |
| 1 | 0019028 | cellular_component | viral capsid |
| 1 | 0042025 | cellular_component | host cell nucleus |
| 2 | 0016032 | biological_process | viral process |
| 2 | 0019028 | cellular_component | viral capsid |
| 2 | 0042025 | cellular_component | host cell nucleus |
| 3 | 0016032 | biological_process | viral process |
| 3 | 0019028 | cellular_component | viral capsid |
| 3 | 0042025 | cellular_component | host cell nucleus |
| 4 | 0005198 | molecular_function | structural molecule activity |
| 4 | 0019028 | cellular_component | viral capsid |
| 4 | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| 4 | 0042025 | cellular_component | host cell nucleus |
| 5 | 0003677 | molecular_function | DNA binding |
| 5 | 0019028 | cellular_component | viral capsid |
| 5 | 0019069 | biological_process | viral capsid assembly |
| 5 | 0042025 | cellular_component | host cell nucleus |
| 6 | 0005198 | molecular_function | structural molecule activity |
| 6 | 0019028 | cellular_component | viral capsid |
| 6 | 0019069 | biological_process | viral capsid assembly |
| 6 | 0042025 | cellular_component | host cell nucleus |
| 7 | 0005198 | molecular_function | structural molecule activity |
| 7 | 0019028 | cellular_component | viral capsid |
| 7 | 0019069 | biological_process | viral capsid assembly |
| 7 | 0042025 | cellular_component | host cell nucleus |
| 8 | 0003677 | molecular_function | DNA binding |
| 8 | 0019028 | cellular_component | viral capsid |
| 8 | 0019069 | biological_process | viral capsid assembly |
| 8 | 0042025 | cellular_component | host cell nucleus |
| 9 | 0005198 | molecular_function | structural molecule activity |
| 9 | 0019028 | cellular_component | viral capsid |
| 9 | 0019069 | biological_process | viral capsid assembly |
| 9 | 0042025 | cellular_component | host cell nucleus |
| a | 0005198 | molecular_function | structural molecule activity |
| a | 0019028 | cellular_component | viral capsid |
| a | 0019069 | biological_process | viral capsid assembly |
| a | 0042025 | cellular_component | host cell nucleus |
| A | 0005198 | molecular_function | structural molecule activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| A | 0042025 | cellular_component | host cell nucleus |
| b | 0003677 | molecular_function | DNA binding |
| b | 0019028 | cellular_component | viral capsid |
| b | 0019069 | biological_process | viral capsid assembly |
| b | 0042025 | cellular_component | host cell nucleus |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| B | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| B | 0042025 | cellular_component | host cell nucleus |
| c | 0005198 | molecular_function | structural molecule activity |
| c | 0019028 | cellular_component | viral capsid |
| c | 0019069 | biological_process | viral capsid assembly |
| c | 0042025 | cellular_component | host cell nucleus |
| C | 0005198 | molecular_function | structural molecule activity |
| C | 0019028 | cellular_component | viral capsid |
| C | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| C | 0042025 | cellular_component | host cell nucleus |
| d | 0005198 | molecular_function | structural molecule activity |
| d | 0019028 | cellular_component | viral capsid |
| d | 0019069 | biological_process | viral capsid assembly |
| d | 0042025 | cellular_component | host cell nucleus |
| D | 0005198 | molecular_function | structural molecule activity |
| D | 0019028 | cellular_component | viral capsid |
| D | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| D | 0042025 | cellular_component | host cell nucleus |
| e | 0003677 | molecular_function | DNA binding |
| e | 0019028 | cellular_component | viral capsid |
| e | 0019069 | biological_process | viral capsid assembly |
| e | 0042025 | cellular_component | host cell nucleus |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| E | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| E | 0042025 | cellular_component | host cell nucleus |
| f | 0005198 | molecular_function | structural molecule activity |
| f | 0019028 | cellular_component | viral capsid |
| f | 0019069 | biological_process | viral capsid assembly |
| f | 0042025 | cellular_component | host cell nucleus |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| F | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| F | 0042025 | cellular_component | host cell nucleus |
| g | 0005198 | molecular_function | structural molecule activity |
| g | 0019028 | cellular_component | viral capsid |
| g | 0019069 | biological_process | viral capsid assembly |
| g | 0042025 | cellular_component | host cell nucleus |
| G | 0016032 | biological_process | viral process |
| G | 0019028 | cellular_component | viral capsid |
| G | 0042025 | cellular_component | host cell nucleus |
| h | 0003677 | molecular_function | DNA binding |
| h | 0019028 | cellular_component | viral capsid |
| h | 0019069 | biological_process | viral capsid assembly |
| h | 0042025 | cellular_component | host cell nucleus |
| H | 0016032 | biological_process | viral process |
| H | 0019028 | cellular_component | viral capsid |
| H | 0042025 | cellular_component | host cell nucleus |
| i | 0005198 | molecular_function | structural molecule activity |
| i | 0019028 | cellular_component | viral capsid |
| i | 0019069 | biological_process | viral capsid assembly |
| i | 0042025 | cellular_component | host cell nucleus |
| I | 0016032 | biological_process | viral process |
| I | 0019028 | cellular_component | viral capsid |
| I | 0042025 | cellular_component | host cell nucleus |
| j | 0005198 | molecular_function | structural molecule activity |
| j | 0019028 | cellular_component | viral capsid |
| j | 0019069 | biological_process | viral capsid assembly |
| j | 0042025 | cellular_component | host cell nucleus |
| J | 0016032 | biological_process | viral process |
| J | 0019028 | cellular_component | viral capsid |
| J | 0042025 | cellular_component | host cell nucleus |
| k | 0019028 | cellular_component | viral capsid |
| k | 0019076 | biological_process | viral release from host cell |
| k | 0042025 | cellular_component | host cell nucleus |
| k | 0044423 | cellular_component | virion component |
| k | 0051276 | biological_process | chromosome organization |
| K | 0016032 | biological_process | viral process |
| K | 0019028 | cellular_component | viral capsid |
| K | 0042025 | cellular_component | host cell nucleus |
| l | 0019028 | cellular_component | viral capsid |
| l | 0019072 | biological_process | viral genome packaging |
| l | 0019076 | biological_process | viral release from host cell |
| l | 0042025 | cellular_component | host cell nucleus |
| l | 0043657 | cellular_component | host cell |
| l | 0046718 | biological_process | symbiont entry into host cell |
| l | 0075732 | biological_process | viral penetration into host nucleus |
| L | 0016032 | biological_process | viral process |
| L | 0019028 | cellular_component | viral capsid |
| L | 0042025 | cellular_component | host cell nucleus |
| m | 0019028 | cellular_component | viral capsid |
| m | 0019072 | biological_process | viral genome packaging |
| m | 0019076 | biological_process | viral release from host cell |
| m | 0042025 | cellular_component | host cell nucleus |
| m | 0043657 | cellular_component | host cell |
| m | 0046718 | biological_process | symbiont entry into host cell |
| m | 0075732 | biological_process | viral penetration into host nucleus |
| M | 0005198 | molecular_function | structural molecule activity |
| M | 0019028 | cellular_component | viral capsid |
| M | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| M | 0042025 | cellular_component | host cell nucleus |
| n | 0004843 | molecular_function | cysteine-type deubiquitinase activity |
| n | 0006508 | biological_process | proteolysis |
| n | 0008233 | molecular_function | peptidase activity |
| n | 0008234 | molecular_function | cysteine-type peptidase activity |
| n | 0016787 | molecular_function | hydrolase activity |
| n | 0019033 | cellular_component | viral tegument |
| n | 0019784 | molecular_function | deNEDDylase activity |
| n | 0030430 | cellular_component | host cell cytoplasm |
| n | 0039648 | biological_process | symbiont-mediated perturbation of host ubiquitin-like protein modification |
| n | 0039693 | biological_process | viral DNA genome replication |
| n | 0042025 | cellular_component | host cell nucleus |
| N | 0005198 | molecular_function | structural molecule activity |
| N | 0019028 | cellular_component | viral capsid |
| N | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| N | 0042025 | cellular_component | host cell nucleus |
| o | 0004843 | molecular_function | cysteine-type deubiquitinase activity |
| o | 0006508 | biological_process | proteolysis |
| o | 0008233 | molecular_function | peptidase activity |
| o | 0008234 | molecular_function | cysteine-type peptidase activity |
| o | 0016787 | molecular_function | hydrolase activity |
| o | 0019033 | cellular_component | viral tegument |
| o | 0019784 | molecular_function | deNEDDylase activity |
| o | 0030430 | cellular_component | host cell cytoplasm |
| o | 0039648 | biological_process | symbiont-mediated perturbation of host ubiquitin-like protein modification |
| o | 0039693 | biological_process | viral DNA genome replication |
| o | 0042025 | cellular_component | host cell nucleus |
| O | 0005198 | molecular_function | structural molecule activity |
| O | 0019028 | cellular_component | viral capsid |
| O | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| O | 0042025 | cellular_component | host cell nucleus |
| P | 0016032 | biological_process | viral process |
| P | 0019028 | cellular_component | viral capsid |
| P | 0042025 | cellular_component | host cell nucleus |
| Q | 0016032 | biological_process | viral process |
| Q | 0019028 | cellular_component | viral capsid |
| Q | 0042025 | cellular_component | host cell nucleus |
| R | 0016032 | biological_process | viral process |
| R | 0019028 | cellular_component | viral capsid |
| R | 0042025 | cellular_component | host cell nucleus |
| S | 0005198 | molecular_function | structural molecule activity |
| S | 0019028 | cellular_component | viral capsid |
| S | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| S | 0042025 | cellular_component | host cell nucleus |
| T | 0005198 | molecular_function | structural molecule activity |
| T | 0019028 | cellular_component | viral capsid |
| T | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| T | 0042025 | cellular_component | host cell nucleus |
| U | 0005198 | molecular_function | structural molecule activity |
| U | 0019028 | cellular_component | viral capsid |
| U | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| U | 0042025 | cellular_component | host cell nucleus |
| V | 0005198 | molecular_function | structural molecule activity |
| V | 0019028 | cellular_component | viral capsid |
| V | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| V | 0042025 | cellular_component | host cell nucleus |
| W | 0005198 | molecular_function | structural molecule activity |
| W | 0019028 | cellular_component | viral capsid |
| W | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| W | 0042025 | cellular_component | host cell nucleus |
| X | 0005198 | molecular_function | structural molecule activity |
| X | 0019028 | cellular_component | viral capsid |
| X | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| X | 0042025 | cellular_component | host cell nucleus |
| Y | 0016032 | biological_process | viral process |
| Y | 0019028 | cellular_component | viral capsid |
| Y | 0042025 | cellular_component | host cell nucleus |
| Z | 0016032 | biological_process | viral process |
| Z | 0019028 | cellular_component | viral capsid |
| Z | 0042025 | cellular_component | host cell nucleus |
