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6C9U

Crystal structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase in complex with antibody fragment (Fab)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004315molecular_function3-oxoacyl-[acyl-carrier-protein] synthase activity
A0006633biological_processfatty acid biosynthetic process
A0016740molecular_functiontransferase activity
A0016746molecular_functionacyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue K A 1001
ChainResidue
AASP300
ASER303
ALEU306
AALA308
AHOH1286
AHOH1495

site_idAC2
Number of Residues5
Detailsbinding site for residue NA A 1002
ChainResidue
AGLY848
AGLU850
AVAL843
AGLU844
AALA846

site_idAC3
Number of Residues6
Detailsbinding site for residue NA A 1003
ChainResidue
AALA543
AALA545
AVAL548
AHOH1287
AHOH1377
AHOH1489

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
HTYR201-HIS207
LTYR214-HIS220

site_idPS00606
Number of Residues17
DetailsKS3_1 Ketosynthase family 3 (KS3) active site signature. GPSisVDtACSSSlvAL
ChainResidueDetails
AGLY194-LEU210

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Acyl-thioester intermediate; for beta-ketoacyl synthase 1 activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01348","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17719492","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"For beta-ketoacyl synthase 1 activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01348","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Acyl-ester intermediate; for acyltransferase 1 activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU10022","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Important for substrate specificity of the beta-ketoacyl synthase 1","evidences":[{"source":"PubMed","id":"17719492","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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