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6C2H

Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the Structure of the Catalytic Core

Functional Information from GO Data
ChainGOidnamespacecontents
A0004122molecular_functioncystathionine beta-synthase activity
A0005737cellular_componentcytoplasm
A0006535biological_processcysteine biosynthetic process from serine
A0019343biological_processcysteine biosynthetic process via cystathionine
Functional Information from PDB Data
site_idAC1
Number of Residues18
Detailsbinding site for residue PLP A 401
ChainResidue
ALYS53
AILE246
ASER289
APRO318
AASP319
AHOH532
AHOH542
AHOH623
AHOH634
AHOH646
AASN84
AALA195
AGLY196
ATHR197
AGLY198
AGLY199
ATHR200
AGLY245

site_idAC2
Number of Residues8
Detailsbinding site for residue ACT A 402
ChainResidue
ALYS53
ATHR81
ASER82
AASN84
ATHR85
AGLN157
AHOH529
AHOH542

site_idAC3
Number of Residues6
Detailsbinding site for residue CA A 403
ChainResidue
AASN183
AASP186
AASN187
AGLN253
AHOH750
AHOH765

site_idAC4
Number of Residues3
Detailsbinding site for residue NA A 404
ChainResidue
AGLY120
AHOH617
AHOH690

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 405
ChainResidue
ALYS107
AMET108
AGLY245

site_idAC6
Number of Residues8
Detailsbinding site for residue PEG A 406
ChainResidue
ALEU45
ALEU45
AASN47
APRO48
ALEU285
AHOH597
AHOH597
AHOH769

site_idAC7
Number of Residues4
Detailsbinding site for residue PEG A 407
ChainResidue
AMET161
ATYR168
ALYS206
AHOH503

site_idAC8
Number of Residues4
Detailsbinding site for residue PEG A 408
ChainResidue
AARG99
AGLU122
AILE123
AHOH509

site_idAC9
Number of Residues4
Detailsbinding site for residue PGE A 409
ChainResidue
ASER59
APHE169
AHOH609
AHOH722

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO A 410
ChainResidue
ALYS242
ATRP333
AHOH506
AHOH590
AHOH755

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 411
ChainResidue
AGLU306
ALEU307
AASP311
AHOH519
AHOH612

site_idAD3
Number of Residues5
Detailsbinding site for residue EDO A 412
ChainResidue
APHE223
ALYS235
ATHR236
AHOH571
AHOH681

Functional Information from PROSITE/UniProt
site_idPS00901
Number of Residues19
DetailsCYS_SYNTHASE Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. KlElyn.PGgSIKdRiAksM
ChainResidueDetails
ALYS42-MET60

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASN84
AGLY196
ASER289

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000250
ChainResidueDetails
ALYS53

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
ChainResidueDetails
ASER134

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
ASER350

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PDB entries from 2024-10-30

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