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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6C0Y

Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	binding site for residue K A 201

Chain	Residue
A	CYS26
A	SER27
A	LEU29
E	ALA42
E	LEU43
E	LEU45

site_id	AC2
Number of Residues	6
Details	binding site for residue K A 202

Chain	Residue
E	CYS26
E	SER27
E	LEU29
A	ALA42
A	LEU43
A	LEU45

site_id	AC3
Number of Residues	6
Details	binding site for residue K B 201

Chain	Residue
B	CYS26
B	SER27
B	LEU29
F	ALA42
F	LEU43
F	LEU45

site_id	AC4
Number of Residues	6
Details	binding site for residue K B 202

Chain	Residue
B	ALA42
B	LEU43
B	LEU45
F	CYS26
F	SER27
F	LEU29

site_id	AC5
Number of Residues	6
Details	binding site for residue K C 201

Chain	Residue
C	CYS26
C	SER27
C	LEU29
G	ALA42
G	LEU43
G	LEU45

site_id	AC6
Number of Residues	6
Details	binding site for residue K C 202

Chain	Residue
C	ALA42
C	LEU43
C	LEU45
G	CYS26
G	SER27
G	LEU29

site_id	AC7
Number of Residues	6
Details	binding site for residue K D 201

Chain	Residue
D	CYS26
D	SER27
D	LEU29
H	ALA42
H	LEU43
H	LEU45

site_id	AC8
Number of Residues	6
Details	binding site for residue K D 202

Chain	Residue
D	ALA42
D	LEU43
D	LEU45
H	CYS26
H	SER27
H	LEU29

site_id	AC9
Number of Residues	13
Details	binding site for Ligand residues DBB I 18 through LYS I 19 bound to ASN I 17

Chain	Residue
F	LEU51
F	ALA52
F	ILE54
I	LYS2
I	GLN3
I	DAL4
I	CYS5
I	ALA6
I	BH215
I	GLY16
I	ASN17
I	HOH103
I	HOH107

site_id	AD1
Number of Residues	6
Details	binding site for Ligand residues DBB J 18 through LYS J 19 bound to ASN J 17

Chain	Residue
E	LEU51
E	ALA52
E	ILE54
J	LYS2
J	ASN17
J	HOH101

site_id	AD2
Number of Residues	12
Details	binding site for Ligand residues DBB K 18 through LYS K 19 bound to ASN K 17

Chain	Residue
H	LEU51
H	ALA52
K	CYS1
K	LYS2
K	DAL4
K	CYS5
K	ALA6
K	BH215
K	ASN17
K	HOH103
K	HOH107
K	HOH109

site_id	AD3
Number of Residues	3
Details	binding site for Ligand DBB L 18 bound to ASN L 17

Chain	Residue
L	CYS1
L	LYS2
L	ASN17

site_id	AD4
Number of Residues	16
Details	binding site for Ligand residues DBB N 18 through ALA N 6 bound to ASN N 17

Chain	Residue
A	LEU51
A	ALA52
A	ILE54
A	HOH326
N	LYS2
N	GLN3
N	DAL4
N	CYS5
N	PHE7
N	BH215
N	GLY16
N	ASN17
N	HOH101
N	HOH103
N	HOH105
N	HOH109

site_id	AD5
Number of Residues	10
Details	binding site for Ligand residues DBB O 18 through LYS O 19 bound to ASN O 17

Chain	Residue
O	LYS2
O	DAL4
O	CYS5
O	ALA6
O	BH215
O	ASN17
O	HOH102
O	HOH105
O	HOH106
O	CYS1

site_id	AD6
Number of Residues	6
Details	binding site for Ligand residues DBB P 18 through LYS P 19 bound to ASN P 17

Chain	Residue
C	LEU51
C	ALA52
C	ILE54
P	LYS2
P	GLN3
P	ASN17

site_id	AD7
Number of Residues	16
Details	binding site for Di-peptide GLN I 3 and DAL I 4

Chain	Residue
E	GLN89
E	ASN90
E	SER92
E	GLY96
I	CYS1
I	LYS2
I	CYS5
I	ALA6
I	CYS14
I	BH215
I	GLY16
I	ASN17
I	LYS19
I	HOH101
I	HOH108
I	HOH112

site_id	AD8
Number of Residues	13
Details	binding site for Di-peptide DAL I 4 and CYS I 5

Chain	Residue
E	GLN89
E	ASN90
I	GLN3
I	ALA6
I	PHE7
I	DBB11
I	PHE12
I	VAL13
I	CYS14
I	BH215
I	GLY16
I	LYS19
I	HOH102

site_id	AD9
Number of Residues	9
Details	binding site for Di-peptide PHE I 10 and DBB I 11

Chain	Residue
B	GLU76
E	ASN90
I	CYS5
I	PHE7
I	GLY8
I	PRO9
I	PHE12
I	HOH104
I	HOH106

site_id	AE1
Number of Residues	14
Details	binding site for Di-peptide DBB I 11 and PHE I 12

Chain	Residue
B	GLU76
E	LEU74
E	VAL86
E	GLN89
E	ASN90
E	HOH323
I	CYS5
I	PHE7
I	GLY8
I	PRO9
I	PHE10
I	VAL13
I	CYS14
I	HOH104

site_id	AE2
Number of Residues	14
Details	binding site for Di-peptide CYS I 14 and BH2 I 15

Chain	Residue
A	VAL13
A	ILE16
A	ARG17
A	GLN20
E	LYS66
E	GLN89
I	DAL4
I	CYS5
I	ALA6
I	PHE7
I	PHE12
I	VAL13
I	GLY16
I	LYS19

site_id	AE3
Number of Residues	13
Details	binding site for Di-peptide BH2 I 15 and GLY I 16

Chain	Residue
A	VAL13
A	ILE16
A	ARG17
E	LYS66
I	GLN3
I	DAL4
I	CYS5
I	ALA6
I	PHE7
I	VAL13
I	CYS14
I	ASN17
I	LYS19

site_id	AE4
Number of Residues	12
Details	binding site for Di-peptide GLN J 3 and DAL J 4

Chain	Residue
F	ASN90
F	SER92
F	GLY96
J	LYS2
J	CYS5
J	ALA6
J	CYS14
J	BH215
J	GLY16
J	ASN17
J	HOH102
J	HOH108

site_id	AE5
Number of Residues	13
Details	binding site for Di-peptide DAL J 4 and CYS J 5

Chain	Residue
F	LYS66
F	ASN90
J	GLN3
J	ALA6
J	PHE7
J	DBB11
J	PHE12
J	VAL13
J	CYS14
J	BH215
J	GLY16
J	HOH104
J	HOH107

site_id	AE6
Number of Residues	14
Details	binding site for Di-peptide PHE J 10 and DBB J 11

Chain	Residue
A	GLU70
A	LEU74
A	GLY75
A	GLU76
F	GLU70
F	ASN90
F	HOH220
J	CYS5
J	PHE7
J	GLY8
J	PRO9
J	PHE12
J	HOH103
J	HOH106

site_id	AE7
Number of Residues	15
Details	binding site for Di-peptide DBB J 11 and PHE J 12

Chain	Residue
A	GLY75
A	GLU76
F	LEU74
F	GLN89
F	ASN90
F	HOH222
J	CYS5
J	PHE7
J	GLY8
J	PRO9
J	PHE10
J	VAL13
J	CYS14
J	HOH103
J	HOH106

site_id	AE8
Number of Residues	13
Details	binding site for Di-peptide CYS J 14 and BH2 J 15

Chain	Residue
B	VAL13
B	ILE16
B	ARG17
B	GLN20
F	LYS66
F	GLN89
J	DAL4
J	CYS5
J	ALA6
J	PHE7
J	PHE12
J	VAL13
J	GLY16

site_id	AE9
Number of Residues	12
Details	binding site for Di-peptide BH2 J 15 and GLY J 16

Chain	Residue
B	VAL13
B	ILE16
B	ARG17
F	LYS66
J	GLN3
J	DAL4
J	CYS5
J	ALA6
J	PHE7
J	VAL13
J	CYS14
J	ASN17

site_id	AF1
Number of Residues	15
Details	binding site for Di-peptide GLN K 3 and DAL K 4

Chain	Residue
G	GLN89
G	ASN90
G	SER92
G	GLY96
K	CYS1
K	LYS2
K	CYS5
K	ALA6
K	CYS14
K	BH215
K	GLY16
K	ASN17
K	LYS19
K	HOH104
K	HOH110

site_id	AF2
Number of Residues	15
Details	binding site for Di-peptide DAL K 4 and CYS K 5

Chain	Residue
G	GLN89
G	ASN90
K	GLN3
K	ALA6
K	PHE7
K	DBB11
K	PHE12
K	VAL13
K	CYS14
K	BH215
K	GLY16
K	LYS19
K	HOH105
K	HOH109
K	HOH112

site_id	AF3
Number of Residues	12
Details	binding site for Di-peptide PHE K 10 and DBB K 11

Chain	Residue
D	GLU70
D	GLY75
D	GLU76
G	GLU70
G	ASN90
G	HOH311
K	CYS5
K	PHE7
K	GLY8
K	PRO9
K	PHE12
K	HOH108

site_id	AF4
Number of Residues	11
Details	binding site for Di-peptide DBB K 11 and PHE K 12

Chain	Residue
G	GLN89
G	ASN90
G	HOH319
K	CYS5
K	PHE7
K	GLY8
K	PRO9
K	PHE10
K	VAL13
K	CYS14
K	HOH108

site_id	AF5
Number of Residues	14
Details	binding site for Di-peptide CYS K 14 and BH2 K 15

Chain	Residue
C	VAL13
C	ILE16
C	ARG17
C	GLN20
G	LYS66
G	GLN89
K	DAL4
K	CYS5
K	ALA6
K	PHE7
K	PHE12
K	VAL13
K	GLY16
K	LYS19

site_id	AF6
Number of Residues	13
Details	binding site for Di-peptide BH2 K 15 and GLY K 16

Chain	Residue
C	VAL13
C	ILE16
C	ARG17
G	LYS66
K	GLN3
K	DAL4
K	CYS5
K	ALA6
K	PHE7
K	VAL13
K	CYS14
K	ASN17
K	LYS19

site_id	AF7
Number of Residues	14
Details	binding site for Di-peptide GLN L 3 and DAL L 4

Chain	Residue
G	HOH301
H	GLN89
H	ASN90
H	SER92
H	GLY96
L	CYS1
L	LYS2
L	CYS5
L	ALA6
L	CYS14
L	BH215
L	GLY16
L	ASN17
L	HOH103

site_id	AF8
Number of Residues	11
Details	binding site for Di-peptide DAL L 4 and CYS L 5

Chain	Residue
H	GLN89
H	ASN90
L	GLN3
L	ALA6
L	PHE7
L	DBB11
L	PHE12
L	VAL13
L	CYS14
L	BH215
L	GLY16

site_id	AF9
Number of Residues	10
Details	binding site for Di-peptide PHE L 10 and DBB L 11

Chain	Residue
H	GLU70
H	ASN90
L	CYS5
L	PHE7
L	GLY8
L	PRO9
L	PHE12
L	HOH101
L	HOH102
L	HOH107

site_id	AG1
Number of Residues	15
Details	binding site for Di-peptide DBB L 11 and PHE L 12

Chain	Residue
C	LEU74
C	GLU76
H	LEU74
H	GLN89
H	ASN90
H	HOH335
L	CYS5
L	PHE7
L	GLY8
L	PRO9
L	PHE10
L	VAL13
L	HOH101
L	HOH107
L	HOH109

site_id	AG2
Number of Residues	13
Details	binding site for Di-peptide CYS L 14 and BH2 L 15

Chain	Residue
D	VAL13
D	ILE16
D	ARG17
D	GLN20
H	LYS66
H	GLN89
L	DAL4
L	CYS5
L	ALA6
L	PHE7
L	VAL13
L	GLY16
L	HOH106

site_id	AG3
Number of Residues	13
Details	binding site for Di-peptide BH2 L 15 and GLY L 16

Chain	Residue
D	VAL13
D	ILE16
D	ARG17
H	LYS66
L	GLN3
L	DAL4
L	CYS5
L	ALA6
L	PHE7
L	VAL13
L	CYS14
L	ASN17
L	HOH106

site_id	AG4
Number of Residues	9
Details	binding site for Di-peptide GLN M 3 and DAL M 4

Chain	Residue
A	ASN90
A	SER92
M	CYS5
M	ALA6
M	CYS14
M	BH215
M	GLY16
M	ASN17
M	HOH101

site_id	AG5
Number of Residues	11
Details	binding site for Di-peptide DAL M 4 and CYS M 5

Chain	Residue
A	LYS66
A	ASN90
M	GLN3
M	ALA6
M	DBB11
M	PHE12
M	VAL13
M	CYS14
M	BH215
M	GLY16
M	HOH103

site_id	AG6
Number of Residues	12
Details	binding site for Di-peptide PHE M 10 and DBB M 11

Chain	Residue
A	GLU70
A	ASN90
A	HOH328
F	GLU70
F	GLU76
M	CYS5
M	PHE7
M	GLY8
M	PRO9
M	PHE12
M	HOH104
M	HOH105

site_id	AG7
Number of Residues	14
Details	binding site for Di-peptide DBB M 11 and PHE M 12

Chain	Residue
A	LEU74
A	VAL86
A	GLN89
A	ASN90
A	HOH328
M	CYS5
M	PHE7
M	GLY8
M	PRO9
M	PHE10
M	VAL13
M	CYS14
M	HOH104
M	HOH105

site_id	AG8
Number of Residues	14
Details	binding site for Di-peptide CYS M 14 and BH2 M 15

Chain	Residue
A	LYS66
A	GLN89
E	VAL13
E	ILE16
E	ARG17
E	GLN20
M	DAL4
M	CYS5
M	ALA6
M	PHE7
M	PHE12
M	VAL13
M	GLY16
M	HOH102

site_id	AG9
Number of Residues	13
Details	binding site for Di-peptide BH2 M 15 and GLY M 16

Chain	Residue
A	LYS66
E	VAL13
E	ILE16
E	ARG17
M	GLN3
M	DAL4
M	CYS5
M	ALA6
M	PHE7
M	VAL13
M	CYS14
M	ASN17
M	HOH102

site_id	AH1
Number of Residues	13
Details	binding site for Di-peptide GLN N 3 and DAL N 4

Chain	Residue
B	GLN89
B	ASN90
B	SER92
B	GLY96
N	CYS1
N	LYS2
N	CYS5
N	ALA6
N	CYS14
N	BH215
N	GLY16
N	ASN17
N	LYS19

site_id	AH2
Number of Residues	15
Details	binding site for Di-peptide DAL N 4 and CYS N 5

Chain	Residue
B	GLN89
B	ASN90
N	GLN3
N	ALA6
N	PHE7
N	DBB11
N	PHE12
N	VAL13
N	CYS14
N	BH215
N	GLY16
N	LYS19
N	HOH103
N	HOH104
N	HOH107

site_id	AH3
Number of Residues	14
Details	binding site for Di-peptide CYS N 5 and DBB N 11

Chain	Residue
B	ASN90
N	DAL4
N	ALA6
N	PHE7
N	GLY8
N	PHE10
N	PHE12
N	VAL13
N	CYS14
N	BH215
N	LYS19
N	HOH103
N	HOH104
N	HOH107

site_id	AH4
Number of Residues	8
Details	binding site for Di-peptide PHE N 10 and DBB N 11

Chain	Residue
B	GLU70
B	ASN90
E	THR71
N	CYS5
N	PHE7
N	GLY8
N	PRO9
N	PHE12

site_id	AH5
Number of Residues	9
Details	binding site for Di-peptide DBB N 11 and PHE N 12

Chain	Residue
B	GLN89
B	ASN90
E	GLU76
N	CYS5
N	PHE7
N	GLY8
N	PHE10
N	VAL13
N	CYS14

site_id	AH6
Number of Residues	14
Details	binding site for Di-peptide CYS N 14 and BH2 N 15

Chain	Residue
B	LYS66
B	GLN89
F	VAL13
F	ILE16
F	ARG17
F	GLN20
N	DAL4
N	CYS5
N	ALA6
N	PHE7
N	PHE12
N	VAL13
N	GLY16
N	LYS19

site_id	AH7
Number of Residues	13
Details	binding site for Di-peptide BH2 N 15 and GLY N 16

Chain	Residue
B	LYS66
F	VAL13
F	ILE16
F	ARG17
N	GLN3
N	DAL4
N	CYS5
N	ALA6
N	PHE7
N	VAL13
N	CYS14
N	ASN17
N	LYS19

site_id	AH8
Number of Residues	13
Details	binding site for Di-peptide GLN O 3 and DAL O 4

Chain	Residue
C	GLN89
C	ASN90
C	SER92
C	GLY96
O	CYS1
O	LYS2
O	CYS5
O	ALA6
O	CYS14
O	BH215
O	GLY16
O	ASN17
O	LYS19

site_id	AH9
Number of Residues	14
Details	binding site for Di-peptide DAL O 4 and CYS O 5

Chain	Residue
C	GLN89
C	ASN90
O	GLN3
O	ALA6
O	PHE7
O	DBB11
O	PHE12
O	VAL13
O	CYS14
O	BH215
O	GLY16
O	LYS19
O	HOH103
O	HOH105

site_id	AI1
Number of Residues	14
Details	binding site for Di-peptide CYS O 5 and DBB O 11

Chain	Residue
C	ASN90
O	DAL4
O	ALA6
O	PHE7
O	GLY8
O	PRO9
O	PHE10
O	PHE12
O	VAL13
O	CYS14
O	BH215
O	LYS19
O	HOH103
O	HOH105

site_id	AI2
Number of Residues	9
Details	binding site for Di-peptide PHE O 10 and DBB O 11

Chain	Residue
C	GLU70
C	ASN90
H	GLU70
H	LEU74
O	CYS5
O	PHE7
O	GLY8
O	PRO9
O	PHE12

site_id	AI3
Number of Residues	11
Details	binding site for Di-peptide DBB O 11 and PHE O 12

Chain	Residue
C	LEU74
C	GLN89
C	ASN90
C	HOH357
O	CYS5
O	PHE7
O	GLY8
O	PRO9
O	PHE10
O	VAL13
O	CYS14

site_id	AI4
Number of Residues	16
Details	binding site for Di-peptide CYS O 14 and BH2 O 15

Chain	Residue
C	LYS66
C	GLN89
G	VAL13
G	ILE16
G	ARG17
G	GLN20
O	DAL4
O	CYS5
O	ALA6
O	PHE7
O	PHE12
O	VAL13
O	GLY16
O	LYS19
O	HOH104
O	HOH107

site_id	AI5
Number of Residues	15
Details	binding site for Di-peptide BH2 O 15 and GLY O 16

Chain	Residue
C	LYS66
G	VAL13
G	ILE16
G	ARG17
O	GLN3
O	DAL4
O	CYS5
O	ALA6
O	PHE7
O	VAL13
O	CYS14
O	ASN17
O	LYS19
O	HOH104
O	HOH107

site_id	AI6
Number of Residues	14
Details	binding site for Di-peptide GLN P 3 and DAL P 4

Chain	Residue
D	GLN89
D	ASN90
D	SER92
D	GLY96
P	CYS1
P	LYS2
P	CYS5
P	ALA6
P	CYS14
P	BH215
P	GLY16
P	ASN17
P	HOH102
P	HOH105

site_id	AI7
Number of Residues	14
Details	binding site for Di-peptide DAL P 4 and CYS P 5

Chain	Residue
D	GLN89
D	ASN90
P	GLN3
P	ALA6
P	PHE7
P	DBB11
P	PHE12
P	VAL13
P	CYS14
P	BH215
P	GLY16
P	HOH101
P	HOH107
P	HOH108

site_id	AI8
Number of Residues	13
Details	binding site for Di-peptide PHE P 10 and DBB P 11

Chain	Residue
D	GLU70
D	ASN90
D	HOH303
G	GLU70
G	LEU74
G	GLY75
G	GLU76
P	CYS5
P	PHE7
P	GLY8
P	PRO9
P	PHE12
P	HOH104

site_id	AI9
Number of Residues	14
Details	binding site for Di-peptide DBB P 11 and PHE P 12

Chain	Residue
D	GLN89
D	ASN90
D	HOH303
D	HOH349
G	GLY75
G	GLU76
P	CYS5
P	PHE7
P	GLY8
P	PRO9
P	PHE10
P	VAL13
P	CYS14
P	HOH104

site_id	AJ1
Number of Residues	14
Details	binding site for Di-peptide CYS P 14 and BH2 P 15

Chain	Residue
D	LYS66
D	GLN89
H	VAL13
H	ILE16
H	ARG17
H	GLN20
P	DAL4
P	CYS5
P	ALA6
P	PHE7
P	PHE12
P	VAL13
P	GLY16
P	HOH106

site_id	AJ2
Number of Residues	13
Details	binding site for Di-peptide BH2 P 15 and GLY P 16

Chain	Residue
D	LYS66
H	VAL13
H	ILE16
H	ARG17
P	GLN3
P	DAL4
P	CYS5
P	ALA6
P	PHE7
P	VAL13
P	CYS14
P	ASN17
P	HOH106

250835

PDB entries from 2026-03-18

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