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6C0O

Crystal structure of HIV-1 K103N mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue K5C A 601
ChainResidue
ALEU100
ATRP229
AHIS235
APRO236
ATYR318
AHOH809
AHOH824
BGLU138
ALYS101
AASN103
ALYS104
AVAL106
AVAL179
ATYR181
ATYR188
APHE227

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 602
ChainResidue
AASP443
AASP498
AASP549
AHOH720
AHOH800
AHOH967
AHOH1026

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 603
ChainResidue
ALYS102
ALYS104
BPRO97
BALA98
BGLY99

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 604
ChainResidue
ALYS73
ATYR146
APRO150
AGLN151

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 605
ChainResidue
ALYS331
AGLY333
AGLN334
ALYS512
AHOH792

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 606
ChainResidue
ALYS476
ASER515
AGLU516
ALEU517

site_idAC7
Number of Residues6
Detailsbinding site for residue SO4 A 607
ChainResidue
ATYR427
AGLN428
ALEU525
ALYS528
AGLU529
AHOH936

site_idAC8
Number of Residues7
Detailsbinding site for residue SO4 A 608
ChainResidue
AGLU138
AGLN500
AHOH717
AHOH730
BASN265
BGLN269
BTRP426

site_idAC9
Number of Residues5
Detailsbinding site for residue EDO A 609
ChainResidue
AGLU6
ALYS166
AHOH818
AHOH905
BILE50

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 610
ChainResidue
ALYS166
ATRP212
AHOH842

site_idAD2
Number of Residues4
Detailsbinding site for residue EDO A 611
ChainResidue
AARG463
AASP488
ASER489
AGLY490

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 612
ChainResidue
ATHR473
AASN474
AGLN475
AHOH757

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO A 613
ChainResidue
ASER268
ATYR339
AGLY352
ALYS353
ALYS374

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO A 614
ChainResidue
ALEU425
ATRP426
ATYR427
AGLN509
AHOH833

site_idAD6
Number of Residues4
Detailsbinding site for residue EDO A 615
ChainResidue
ALEU486
ASER489
AGLN524
ALYS528

site_idAD7
Number of Residues4
Detailsbinding site for residue EDO A 616
ChainResidue
ATRP88
BLYS20
BLYS22
BHOH694

site_idAD8
Number of Residues7
Detailsbinding site for residue EDO A 617
ChainResidue
AGLU404
ATYR405
ATRP406
AGLN507
AGLN509
BLYS424
BSO4503

site_idAD9
Number of Residues8
Detailsbinding site for residue DMS B 501
ChainResidue
BTRP401
BGLU404
BHOH641
BHOH799
AILE380
BTHR27
BLYS30
BTHR400

site_idAE1
Number of Residues4
Detailsbinding site for residue SO4 B 502
ChainResidue
BPRO55
BLYS126
BHOH724
BHOH773

site_idAE2
Number of Residues6
Detailsbinding site for residue SO4 B 503
ChainResidue
ATHR403
AGLU404
AEDO617
BLYS331
BGLN332
BLYS424

site_idAE3
Number of Residues3
Detailsbinding site for residue SO4 B 504
ChainResidue
BLYS275
BVAL276
BARG277

site_idAE4
Number of Residues3
Detailsbinding site for residue SO4 B 505
ChainResidue
BHIS235
BTRP239
BHOH688

site_idAE5
Number of Residues6
Detailsbinding site for residue EDO B 506
ChainResidue
BGLU328
BILE329
BGLN330
BPRO392
BPRO421
BHOH737

site_idAE6
Number of Residues6
Detailsbinding site for residue EDO B 507
ChainResidue
BVAL75
BPHE77
BGLY152
BILE411
BHOH633
BHOH797

site_idAE7
Number of Residues4
Detailsbinding site for residue EDO B 508
ChainResidue
BTYR183
BLYS385
BTHR386
BHOH784

site_idAE8
Number of Residues5
Detailsbinding site for residue EDO B 509
ChainResidue
BGLN242
BTYR339
BGLY352
BLYS353
BHOH782

site_idAE9
Number of Residues7
Detailsbinding site for residue EDO B 510
ChainResidue
BLYS66
BTYR232
BGLU370
BGLN373
BLYS374
BGLN407
BHOH754

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues190
DetailsDomain: {"description":"Reverse transcriptase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00405","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsRegion: {"description":"RT 'primer grip'"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsMotif: {"description":"Tryptophan repeat motif"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsSite: {"description":"Essential for RT p66/p51 heterodimerization"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsSite: {"description":"Cleavage; by viral protease; partial"}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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