6C07
Crystal Structure of S-Adenosylmethionine synthetase (MetK/Mat) from Cryptosporidium parvum
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004478 | molecular_function | methionine adenosyltransferase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0006556 | biological_process | S-adenosylmethionine biosynthetic process |
A | 0006730 | biological_process | one-carbon metabolic process |
A | 0016740 | molecular_function | transferase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0004478 | molecular_function | methionine adenosyltransferase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0006556 | biological_process | S-adenosylmethionine biosynthetic process |
B | 0006730 | biological_process | one-carbon metabolic process |
B | 0016740 | molecular_function | transferase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0004478 | molecular_function | methionine adenosyltransferase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005829 | cellular_component | cytosol |
C | 0006556 | biological_process | S-adenosylmethionine biosynthetic process |
C | 0006730 | biological_process | one-carbon metabolic process |
C | 0016740 | molecular_function | transferase activity |
C | 0046872 | molecular_function | metal ion binding |
D | 0004478 | molecular_function | methionine adenosyltransferase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005829 | cellular_component | cytosol |
D | 0006556 | biological_process | S-adenosylmethionine biosynthetic process |
D | 0006730 | biological_process | one-carbon metabolic process |
D | 0016740 | molecular_function | transferase activity |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue CL A 501 |
Chain | Residue |
A | GLY288 |
A | ALA289 |
A | LYS293 |
B | ARG272 |
B | HOH714 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue MG A 502 |
Chain | Residue |
A | HOH786 |
B | HOH643 |
A | ASP266 |
A | ALA267 |
A | HOH682 |
A | HOH692 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue MG A 503 |
Chain | Residue |
A | ASP139 |
A | HOH632 |
A | HOH729 |
A | HOH773 |
A | HOH822 |
B | HOH679 |
site_id | AC4 |
Number of Residues | 6 |
Details | binding site for residue MG B 501 |
Chain | Residue |
B | GLY182 |
B | HOH647 |
B | HOH694 |
B | HOH766 |
B | HOH795 |
B | HOH811 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue MG B 502 |
Chain | Residue |
A | HOH698 |
B | ASP266 |
B | ALA267 |
B | HOH671 |
B | HOH705 |
B | HOH763 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue K C 501 |
Chain | Residue |
C | GLY271 |
D | GLY271 |
D | HOH709 |
D | HOH776 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue CL C 502 |
Chain | Residue |
C | HIS34 |
C | LYS189 |
C | LYS273 |
C | HOH797 |
C | HOH824 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue MG C 503 |
Chain | Residue |
C | ASP266 |
C | ALA267 |
C | HOH609 |
C | HOH653 |
C | HOH845 |
D | HOH642 |
site_id | AC9 |
Number of Residues | 6 |
Details | binding site for residue MG C 504 |
Chain | Residue |
C | ASP139 |
C | HOH642 |
C | HOH703 |
C | HOH747 |
C | HOH832 |
D | HOH638 |
site_id | AD1 |
Number of Residues | 7 |
Details | binding site for residue MG D 501 |
Chain | Residue |
D | ASP36 |
D | LYS273 |
D | HOH615 |
D | HOH639 |
D | HOH653 |
D | HOH686 |
D | HOH803 |
Functional Information from PROSITE/UniProt
site_id | PS00178 |
Number of Residues | 10 |
Details | AA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. P..SGrFTIGGP |
Chain | Residue | Details |
A | PRO254-PRO263 |
site_id | PS00376 |
Number of Residues | 11 |
Details | ADOMET_SYNTHASE_1 S-adenosylmethionine synthase signature 1. GAGDQGmmfGY |
Chain | Residue | Details |
A | GLY136-TYR146 |
site_id | PS00377 |
Number of Residues | 9 |
Details | ADOMET_SYNTHASE_2 S-adenosylmethionine synthase signature 2. GGGAFSgKD |
Chain | Residue | Details |
A | GLY286-ASP294 |