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6BRX

Crystal Structure of Human DNA polymerase kappa in complex with DNA containing the major cisplatin lesion

Functional Information from GO Data
ChainGOidnamespacecontents
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006281biological_processDNA repair
B0003684molecular_functiondamaged DNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue MG A 601
ChainResidue
AASP107
AMET108
AASP198
A0KX604

site_idAC2
Number of Residues4
Detailsbinding site for residue MG A 602
ChainResidue
AARG352
AVAL354
AILE357
CDA12

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 603
ChainResidue
AASP198
AGLU199
A0KX604
CDC13
AASP107

site_idAC4
Number of Residues18
Detailsbinding site for residue 0KX A 604
ChainResidue
AASP107
AMET108
AASP109
AALA110
APHE111
ATYR112
ASER137
ATHR138
ATYR141
AARG144
AASP198
ALYS328
AMG601
AMG603
AHOH771
CDC13
DDG5
DPEG601

site_idAC5
Number of Residues4
Detailsbinding site for residue MG B 601
ChainResidue
BASP107
BMET108
BASP198
B0KX602

site_idAC6
Number of Residues17
Detailsbinding site for residue 0KX B 602
ChainResidue
BASP107
BMET108
BASP109
BALA110
BPHE111
BTYR112
BSER137
BTHR138
BTYR141
BARG144
BASP198
BLYS328
BMG601
BHOH729
PDC13
TDG5
TPEG601

site_idAC7
Number of Residues3
Detailsbinding site for residue PEG D 601
ChainResidue
A0KX604
DDG5
DDG6

site_idAC8
Number of Residues3
Detailsbinding site for residue CPT D 602
ChainResidue
DDG5
DDG6
DHOH702

site_idAC9
Number of Residues4
Detailsbinding site for residue MG P 101
ChainResidue
BARG352
BVAL354
BILE357
PDA12

site_idAD1
Number of Residues3
Detailsbinding site for residue PEG T 601
ChainResidue
B0KX602
TDG5
TDG6

site_idAD2
Number of Residues5
Detailsbinding site for residue CPT T 602
ChainResidue
TDG5
TDG6
THOH702
THOH705
THOH706

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP107
AASP198
AGLU199
BASP107
BASP198
BGLU199

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PDB entries from 2024-07-17

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