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6BMM

Structure of human DHHC20 palmitoyltransferase, space group P21

Functional Information from GO Data
ChainGOidnamespacecontents
A0016409molecular_functionpalmitoyltransferase activity
B0016409molecular_functionpalmitoyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS142
ACYS145
AHIS155
ACYS162

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 402
ChainResidue
ACYS128
ACYS131
AHIS141
ACYS148

site_idAC3
Number of Residues4
Detailsbinding site for residue PO4 A 403
ChainResidue
AHIS140
AHIS141
AHOH516
ALYS135

site_idAC4
Number of Residues8
Detailsbinding site for residue OLB A 404
ChainResidue
ACME156
APRO157
ATRP158
APHE174
ATYR181
APHE220
AVAL224
ALEU227

site_idAC5
Number of Residues1
Detailsbinding site for residue DYD A 405
ChainResidue
ALEU279

site_idAC6
Number of Residues2
Detailsbinding site for residue DYD A 406
ChainResidue
ATYR277
APHE283

site_idAC7
Number of Residues1
Detailsbinding site for residue DYD A 407
ChainResidue
ATRP67

site_idAC8
Number of Residues4
Detailsbinding site for residue DYD A 408
ChainResidue
ATRP267
APHE271
ATRP278
ALEU279

site_idAC9
Number of Residues3
Detailsbinding site for residue DYD A 409
ChainResidue
AGLU191
AILE194
BVAL53

site_idAD1
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BCYS128
BCYS131
BHIS141
BCYS148

site_idAD2
Number of Residues4
Detailsbinding site for residue ZN B 402
ChainResidue
BCYS142
BCYS145
BHIS155
BCYS162

site_idAD3
Number of Residues4
Detailsbinding site for residue PO4 B 403
ChainResidue
BARG126
BLYS135
BHIS140
BHIS141

site_idAD4
Number of Residues4
Detailsbinding site for residue OLB B 404
ChainResidue
BCME156
BPRO157
BTRP158
BPHE220

site_idAD5
Number of Residues2
Detailsbinding site for residue DYD B 405
ChainResidue
BLYS275
BLYS276

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues166
DetailsTRANSMEM: Helical => ECO:0000269|PubMed:29326245
ChainResidueDetails
AGLY15-VAL35
ATYR54-PHE74
APHE170-LEU190
APHE208-HIS231
BGLY15-VAL35
BTYR54-PHE74
BPHE170-LEU190
BPHE208-HIS231

site_idSWS_FT_FI2
Number of Residues66
DetailsTOPO_DOM: Lumenal => ECO:0000269|PubMed:29326245
ChainResidueDetails
AGLU36-VAL53
AGLU191-LYS207
BGLU36-VAL53
BGLU191-LYS207

site_idSWS_FT_FI3
Number of Residues188
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:29326245
ChainResidueDetails
ATHR75-LYS169
BTHR75-LYS169

site_idSWS_FT_FI4
Number of Residues2
DetailsACT_SITE: S-palmitoyl cysteine intermediate => ECO:0000269|PubMed:29326245
ChainResidueDetails
ACME156
BCME156

site_idSWS_FT_FI5
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:29326245, ECO:0007744|PDB:6BMN
ChainResidueDetails
ACYS128
BCYS131
BHIS141
BCYS142
BCYS145
BCYS148
BHIS155
BCYS162
ACYS131
AHIS141
ACYS142
ACYS145
ACYS148
AHIS155
ACYS162
BCYS128

site_idSWS_FT_FI6
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305|PubMed:29326245
ChainResidueDetails
ALYS135
AHIS140
BLYS135
BHIS140

site_idSWS_FT_FI7
Number of Residues4
DetailsSITE: Important for selectivity toward medium-length fatty acids => ECO:0000269|PubMed:29326245
ChainResidueDetails
ASER29
ATYR181
BSER29
BTYR181

222624

PDB entries from 2024-07-17

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