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6BJE

Crystal Structure of Lysophospholipase A2 Conjugated with Phenylmethylsulfonyl Fluoride

Functional Information from GO Data
ChainGOidnamespacecontents
A0004622molecular_functionphosphatidylcholine lysophospholipase activity
A0005515molecular_functionprotein binding
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005795cellular_componentGolgi stack
A0005829cellular_componentcytosol
A0006629biological_processlipid metabolic process
A0006631biological_processfatty acid metabolic process
A0007411biological_processaxon guidance
A0008474molecular_functionpalmitoyl-(protein) hydrolase activity
A0016787molecular_functionhydrolase activity
A0045296molecular_functioncadherin binding
A0046464biological_processacylglycerol catabolic process
A0070062cellular_componentextracellular exosome
A0098734biological_processmacromolecule depalmitoylation
A1905344biological_processprostaglandin catabolic process
B0004622molecular_functionphosphatidylcholine lysophospholipase activity
B0005515molecular_functionprotein binding
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005795cellular_componentGolgi stack
B0005829cellular_componentcytosol
B0006629biological_processlipid metabolic process
B0006631biological_processfatty acid metabolic process
B0007411biological_processaxon guidance
B0008474molecular_functionpalmitoyl-(protein) hydrolase activity
B0016787molecular_functionhydrolase activity
B0045296molecular_functioncadherin binding
B0046464biological_processacylglycerol catabolic process
B0070062cellular_componentextracellular exosome
B0098734biological_processmacromolecule depalmitoylation
B1905344biological_processprostaglandin catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue PMS A 301
ChainResidue
ALEU33
ALEU78
ASER122
AGLN123
ATRP148
AMET178
AHIS210
BASN67

site_idAC2
Number of Residues15
Detailsbinding site for Di-peptide PMS B 301 and SER B 122
ChainResidue
BLEU66
BLEU78
BPHE121
BGLN123
BGLY124
BGLY125
BALA126
BLEU145
BSER146
BCYS147
BTRP148
BMET178
BVAL179
BHIS210
BLEU33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Charge relay system","evidences":[{"source":"PubMed","id":"28826475","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Charge relay system","evidences":[{"source":"UniProtKB","id":"O75608","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9QYL8","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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