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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6BHD

Crystal structure of SETDB1 with a modified H3 peptide

Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue NA A 535
ChainResidue
ATHR338
AHOH668
AHOH734
AHOH746
AHOH783
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues50
DetailsDomain: {"description":"Tudor 1; degenerate","evidences":[{"source":"PubMed","id":"29234025","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6BHD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHI","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues56
DetailsDomain: {"description":"Tudor 3","evidences":[{"evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29234025","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6BHD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6BHI","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16457588","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"5-glutamyl serotonin; alternate","evidences":[{"source":"PubMed","id":"30867594","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine; by PKC","evidences":[{"source":"PubMed","id":"20228790","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Symmetric dimethylarginine; by PRMT5; alternate","evidences":[{"source":"UniProtKB","id":"P68433","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues1
DetailsModified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"11242053","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16185088","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16457588","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; alternate; by AURKB, AURKC, RPS6KA3, RPS6KA4 and RPS6KA5","evidences":[{"source":"PubMed","id":"10464286","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11856369","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12560483","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15681610","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16185088","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16457588","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

248942

PDB entries from 2026-02-11

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