6BGY
LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR 2-((2-chlorophenyl)(2-(1-methylpyrrolidin-2-yl)ethoxy)methyl)-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid(Compound 46)
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue DLJ A 601 |
| Chain | Residue |
| A | TYR409 |
| A | LYS501 |
| A | TRP503 |
| A | HIS571 |
| A | MN602 |
| A | EDO605 |
| A | HOH773 |
| A | HOH868 |
| A | ALA411 |
| A | ASP412 |
| A | TYR472 |
| A | SER479 |
| A | PHE480 |
| A | CYS481 |
| A | HIS483 |
| A | ILE484 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue MN A 602 |
| Chain | Residue |
| A | HIS483 |
| A | GLU485 |
| A | HIS571 |
| A | DLJ601 |
| A | HOH726 |
| A | HOH773 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 603 |
| Chain | Residue |
| A | ASN556 |
| A | CYS558 |
| A | HOH753 |
| A | HOH789 |
| A | HOH804 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 604 |
| Chain | Residue |
| A | GLU23 |
| A | PRO53 |
| A | HOH794 |
| A | HOH858 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | binding site for residue EDO A 605 |
| Chain | Residue |
| A | GLN75 |
| A | SER479 |
| A | PHE480 |
| A | CYS481 |
| A | ILE539 |
| A | DLJ601 |
| A | HOH825 |
| A | HOH850 |
| A | HOH884 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 606 |
| Chain | Residue |
| A | MET384 |
| A | PRO567 |
| A | HOH704 |
| A | HOH893 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | binding site for residue DMS A 607 |
| Chain | Residue |
| A | MET384 |
| A | HOH709 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue DMS A 608 |
| Chain | Residue |
| A | GLU64 |
| A | VAL65 |
| A | LYS66 |
| A | ARG429 |
| site_id | AC9 |
| Number of Residues | 11 |
| Details | binding site for residue GOL A 609 |
| Chain | Residue |
| A | MET380 |
| A | PRO381 |
| A | GLU485 |
| A | ASP486 |
| A | HIS487 |
| A | TRP488 |
| A | LEU532 |
| A | HOH713 |
| A | HOH771 |
| A | HOH808 |
| A | HOH823 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 41 |
| Details | Domain: {"description":"JmjN","evidences":[{"source":"PROSITE-ProRule","id":"PRU00537","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Motif: {"description":"GSGFP motif","evidences":[{"source":"UniProtKB","id":"Q3UXZ9","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27214401","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27499454","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27214401","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27499454","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
