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6B96

Crystal Structure of PDE2 in complex with compound 16

Functional Information from GO Data
ChainGOidnamespacecontents
A0004114molecular_function3',5'-cyclic-nucleotide phosphodiesterase activity
A0007165biological_processsignal transduction
A0008081molecular_functionphosphoric diester hydrolase activity
B0004114molecular_function3',5'-cyclic-nucleotide phosphodiesterase activity
B0007165biological_processsignal transduction
B0008081molecular_functionphosphoric diester hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue ZN A 1001
ChainResidue
AHIS660
AHIS696
AASP697
AASP808
AHOH1107
AHOH1162

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 1002
ChainResidue
AHOH1123
AHOH1134
AHOH1157
AASP697
AHOH1102
AHOH1107

site_idAC3
Number of Residues13
Detailsbinding site for residue CZV A 1003
ChainResidue
AHIS656
ATHR768
ALEU770
ATHR805
AASP808
ALEU809
ATYR827
AGLN859
APHE862
AHOH1120
AHOH1125
AHOH1187
AHOH1199

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO A 1004
ChainResidue
AILE735
AASN739
ATYR754
BARG751

site_idAC5
Number of Residues6
Detailsbinding site for residue ZN B 1001
ChainResidue
BHIS660
BHIS696
BASP697
BASP808
BHOH1110
BHOH1156

site_idAC6
Number of Residues6
Detailsbinding site for residue MG B 1002
ChainResidue
BASP697
BHOH1107
BHOH1110
BHOH1138
BHOH1157
BHOH1218

site_idAC7
Number of Residues13
Detailsbinding site for residue CZV B 1003
ChainResidue
BTHR768
BLEU770
BTHR805
BASP808
BILE826
BTYR827
BGLN859
BPHE862
BEDO1004
BHOH1139
BHOH1161
BHOH1211
BHOH1212

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO B 1004
ChainResidue
BTHR768
BASP769
BLEU770
BCZV1003
BHOH1120
BHOH1212

Functional Information from PROSITE/UniProt
site_idPS00126
Number of Residues12
DetailsPDEASE_I_1 3'5'-cyclic nucleotide phosphodiesterase domain signature. HDLdHrGtnNsF
ChainResidueDetails
AHIS696-PHE707

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000250|UniProtKB:O76083
ChainResidueDetails
ASER912
BSER912

site_idSWS_FT_FI2
Number of Residues10
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q922S4
ChainResidueDetails
APHE687
BGLN755
AGLY702
ASER721
AASN744
AGLN755
BPHE687
BGLY702
BSER721
BASN744

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:15938621, ECO:0000269|PubMed:19828435, ECO:0000269|PubMed:23899287, ECO:0007744|PDB:1Z1L, ECO:0007744|PDB:3IBJ, ECO:0007744|PDB:3ITM, ECO:0007744|PDB:3ITU, ECO:0007744|PDB:4HTX, ECO:0007744|PDB:4HTZ, ECO:0007744|PDB:4JIB
ChainResidueDetails
ALEU916
BLEU916

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PDB entries from 2024-10-09

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