6B43

CryoEM structure and atomic model of the Kaposi's sarcoma-associated herpesvirus capsid

This is a non-PDB format compatible entry.

Replaces:  3J9A

Functional Information from GO Data

Chain	GOid	namespace	contents
0	0016032	biological_process	viral process
0	0019028	cellular_component	viral capsid
0	0042025	cellular_component	host cell nucleus
0	0044423	cellular_component	virion component
1	0016032	biological_process	viral process
1	0019028	cellular_component	viral capsid
1	0042025	cellular_component	host cell nucleus
1	0044423	cellular_component	virion component
2	0016032	biological_process	viral process
2	0019028	cellular_component	viral capsid
2	0042025	cellular_component	host cell nucleus
2	0044423	cellular_component	virion component
3	0016032	biological_process	viral process
3	0019028	cellular_component	viral capsid
3	0042025	cellular_component	host cell nucleus
3	0044423	cellular_component	virion component
4	0005198	molecular_function	structural molecule activity
4	0019028	cellular_component	viral capsid
4	0039622	cellular_component	T=16 icosahedral viral capsid
4	0044423	cellular_component	virion component
5	0003677	molecular_function	DNA binding
5	0005515	molecular_function	protein binding
5	0019028	cellular_component	viral capsid
5	0019069	biological_process	viral capsid assembly
5	0044423	cellular_component	virion component
6	0005198	molecular_function	structural molecule activity
6	0019028	cellular_component	viral capsid
6	0044423	cellular_component	virion component
7	0005198	molecular_function	structural molecule activity
7	0019028	cellular_component	viral capsid
7	0044423	cellular_component	virion component
8	0003677	molecular_function	DNA binding
8	0005515	molecular_function	protein binding
8	0019028	cellular_component	viral capsid
8	0019069	biological_process	viral capsid assembly
8	0044423	cellular_component	virion component
9	0005198	molecular_function	structural molecule activity
9	0019028	cellular_component	viral capsid
9	0044423	cellular_component	virion component
a	0005198	molecular_function	structural molecule activity
a	0019028	cellular_component	viral capsid
a	0044423	cellular_component	virion component
A	0005198	molecular_function	structural molecule activity
A	0019028	cellular_component	viral capsid
A	0039622	cellular_component	T=16 icosahedral viral capsid
A	0044423	cellular_component	virion component
b	0003677	molecular_function	DNA binding
b	0005515	molecular_function	protein binding
b	0019028	cellular_component	viral capsid
b	0019069	biological_process	viral capsid assembly
b	0044423	cellular_component	virion component
B	0005198	molecular_function	structural molecule activity
B	0019028	cellular_component	viral capsid
B	0039622	cellular_component	T=16 icosahedral viral capsid
B	0044423	cellular_component	virion component
c	0005198	molecular_function	structural molecule activity
c	0019028	cellular_component	viral capsid
c	0044423	cellular_component	virion component
C	0005198	molecular_function	structural molecule activity
C	0019028	cellular_component	viral capsid
C	0039622	cellular_component	T=16 icosahedral viral capsid
C	0044423	cellular_component	virion component
d	0005198	molecular_function	structural molecule activity
d	0019028	cellular_component	viral capsid
d	0044423	cellular_component	virion component
D	0005198	molecular_function	structural molecule activity
D	0019028	cellular_component	viral capsid
D	0039622	cellular_component	T=16 icosahedral viral capsid
D	0044423	cellular_component	virion component
e	0003677	molecular_function	DNA binding
e	0005515	molecular_function	protein binding
e	0019028	cellular_component	viral capsid
e	0019069	biological_process	viral capsid assembly
e	0044423	cellular_component	virion component
E	0005198	molecular_function	structural molecule activity
E	0019028	cellular_component	viral capsid
E	0039622	cellular_component	T=16 icosahedral viral capsid
E	0044423	cellular_component	virion component
f	0005198	molecular_function	structural molecule activity
f	0019028	cellular_component	viral capsid
f	0044423	cellular_component	virion component
F	0005198	molecular_function	structural molecule activity
F	0019028	cellular_component	viral capsid
F	0039622	cellular_component	T=16 icosahedral viral capsid
F	0044423	cellular_component	virion component
g	0005198	molecular_function	structural molecule activity
g	0019028	cellular_component	viral capsid
g	0044423	cellular_component	virion component
G	0016032	biological_process	viral process
G	0019028	cellular_component	viral capsid
G	0042025	cellular_component	host cell nucleus
G	0044423	cellular_component	virion component
h	0003677	molecular_function	DNA binding
h	0005515	molecular_function	protein binding
h	0019028	cellular_component	viral capsid
h	0019069	biological_process	viral capsid assembly
h	0044423	cellular_component	virion component
H	0016032	biological_process	viral process
H	0019028	cellular_component	viral capsid
H	0042025	cellular_component	host cell nucleus
H	0044423	cellular_component	virion component
i	0005198	molecular_function	structural molecule activity
i	0019028	cellular_component	viral capsid
i	0044423	cellular_component	virion component
I	0016032	biological_process	viral process
I	0019028	cellular_component	viral capsid
I	0042025	cellular_component	host cell nucleus
I	0044423	cellular_component	virion component
j	0005198	molecular_function	structural molecule activity
j	0019028	cellular_component	viral capsid
j	0044423	cellular_component	virion component
J	0016032	biological_process	viral process
J	0019028	cellular_component	viral capsid
J	0042025	cellular_component	host cell nucleus
J	0044423	cellular_component	virion component
K	0016032	biological_process	viral process
K	0019028	cellular_component	viral capsid
K	0042025	cellular_component	host cell nucleus
K	0044423	cellular_component	virion component
L	0016032	biological_process	viral process
L	0019028	cellular_component	viral capsid
L	0042025	cellular_component	host cell nucleus
L	0044423	cellular_component	virion component
M	0005198	molecular_function	structural molecule activity
M	0019028	cellular_component	viral capsid
M	0039622	cellular_component	T=16 icosahedral viral capsid
M	0044423	cellular_component	virion component
N	0005198	molecular_function	structural molecule activity
N	0019028	cellular_component	viral capsid
N	0039622	cellular_component	T=16 icosahedral viral capsid
N	0044423	cellular_component	virion component
O	0005198	molecular_function	structural molecule activity
O	0019028	cellular_component	viral capsid
O	0039622	cellular_component	T=16 icosahedral viral capsid
O	0044423	cellular_component	virion component
P	0016032	biological_process	viral process
P	0019028	cellular_component	viral capsid
P	0042025	cellular_component	host cell nucleus
P	0044423	cellular_component	virion component
Q	0016032	biological_process	viral process
Q	0019028	cellular_component	viral capsid
Q	0042025	cellular_component	host cell nucleus
Q	0044423	cellular_component	virion component
R	0016032	biological_process	viral process
R	0019028	cellular_component	viral capsid
R	0042025	cellular_component	host cell nucleus
R	0044423	cellular_component	virion component
S	0005198	molecular_function	structural molecule activity
S	0019028	cellular_component	viral capsid
S	0039622	cellular_component	T=16 icosahedral viral capsid
S	0044423	cellular_component	virion component
T	0005198	molecular_function	structural molecule activity
T	0019028	cellular_component	viral capsid
T	0039622	cellular_component	T=16 icosahedral viral capsid
T	0044423	cellular_component	virion component
U	0005198	molecular_function	structural molecule activity
U	0019028	cellular_component	viral capsid
U	0039622	cellular_component	T=16 icosahedral viral capsid
U	0044423	cellular_component	virion component
V	0005198	molecular_function	structural molecule activity
V	0019028	cellular_component	viral capsid
V	0039622	cellular_component	T=16 icosahedral viral capsid
V	0044423	cellular_component	virion component
W	0005198	molecular_function	structural molecule activity
W	0019028	cellular_component	viral capsid
W	0039622	cellular_component	T=16 icosahedral viral capsid
W	0044423	cellular_component	virion component
X	0005198	molecular_function	structural molecule activity
X	0019028	cellular_component	viral capsid
X	0039622	cellular_component	T=16 icosahedral viral capsid
X	0044423	cellular_component	virion component
Y	0016032	biological_process	viral process
Y	0019028	cellular_component	viral capsid
Y	0042025	cellular_component	host cell nucleus
Y	0044423	cellular_component	virion component
Z	0016032	biological_process	viral process
Z	0019028	cellular_component	viral capsid
Z	0042025	cellular_component	host cell nucleus
Z	0044423	cellular_component	virion component

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. FICQAKH

Chain	Residue	Details
A	PHE1024-HIS1030

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