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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6B1T

Improved cryoEM structure of human adenovirus type 5 with atomic details of minor proteins VI and VII

This is a non-PDB format compatible entry.
Replaces:  3IYN
Functional Information from GO Data
ChainGOidnamespacecontents
A0005198molecular_functionstructural molecule activity
A0019028cellular_componentviral capsid
A0039623cellular_componentT=25 icosahedral viral capsid
A0042025cellular_componenthost cell nucleus
A0043657cellular_componenthost cell
A0044423cellular_componentvirion component
A0046718biological_processsymbiont entry into host cell
A0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
A0075606biological_processtransport of viral material towards nucleus
B0005198molecular_functionstructural molecule activity
B0019028cellular_componentviral capsid
B0039623cellular_componentT=25 icosahedral viral capsid
B0042025cellular_componenthost cell nucleus
B0043657cellular_componenthost cell
B0044423cellular_componentvirion component
B0046718biological_processsymbiont entry into host cell
B0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
B0075606biological_processtransport of viral material towards nucleus
C0005198molecular_functionstructural molecule activity
C0019028cellular_componentviral capsid
C0039623cellular_componentT=25 icosahedral viral capsid
C0042025cellular_componenthost cell nucleus
C0043657cellular_componenthost cell
C0044423cellular_componentvirion component
C0046718biological_processsymbiont entry into host cell
C0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
C0075606biological_processtransport of viral material towards nucleus
D0005198molecular_functionstructural molecule activity
D0019028cellular_componentviral capsid
D0039623cellular_componentT=25 icosahedral viral capsid
D0042025cellular_componenthost cell nucleus
D0043657cellular_componenthost cell
D0044423cellular_componentvirion component
D0046718biological_processsymbiont entry into host cell
D0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
D0075606biological_processtransport of viral material towards nucleus
E0005198molecular_functionstructural molecule activity
E0019028cellular_componentviral capsid
E0039623cellular_componentT=25 icosahedral viral capsid
E0042025cellular_componenthost cell nucleus
E0043657cellular_componenthost cell
E0044423cellular_componentvirion component
E0046718biological_processsymbiont entry into host cell
E0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
E0075606biological_processtransport of viral material towards nucleus
F0005198molecular_functionstructural molecule activity
F0019028cellular_componentviral capsid
F0039623cellular_componentT=25 icosahedral viral capsid
F0042025cellular_componenthost cell nucleus
F0043657cellular_componenthost cell
F0044423cellular_componentvirion component
F0046718biological_processsymbiont entry into host cell
F0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
F0075606biological_processtransport of viral material towards nucleus
G0005198molecular_functionstructural molecule activity
G0019028cellular_componentviral capsid
G0039623cellular_componentT=25 icosahedral viral capsid
G0042025cellular_componenthost cell nucleus
G0043657cellular_componenthost cell
G0044423cellular_componentvirion component
G0046718biological_processsymbiont entry into host cell
G0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
G0075606biological_processtransport of viral material towards nucleus
H0005198molecular_functionstructural molecule activity
H0019028cellular_componentviral capsid
H0039623cellular_componentT=25 icosahedral viral capsid
H0042025cellular_componenthost cell nucleus
H0043657cellular_componenthost cell
H0044423cellular_componentvirion component
H0046718biological_processsymbiont entry into host cell
H0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
H0075606biological_processtransport of viral material towards nucleus
I0005198molecular_functionstructural molecule activity
I0019028cellular_componentviral capsid
I0039623cellular_componentT=25 icosahedral viral capsid
I0042025cellular_componenthost cell nucleus
I0043657cellular_componenthost cell
I0044423cellular_componentvirion component
I0046718biological_processsymbiont entry into host cell
I0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
I0075606biological_processtransport of viral material towards nucleus
J0005198molecular_functionstructural molecule activity
J0019028cellular_componentviral capsid
J0039623cellular_componentT=25 icosahedral viral capsid
J0042025cellular_componenthost cell nucleus
J0043657cellular_componenthost cell
J0044423cellular_componentvirion component
J0046718biological_processsymbiont entry into host cell
J0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
J0075606biological_processtransport of viral material towards nucleus
K0005198molecular_functionstructural molecule activity
K0019028cellular_componentviral capsid
K0039623cellular_componentT=25 icosahedral viral capsid
K0042025cellular_componenthost cell nucleus
K0043657cellular_componenthost cell
K0044423cellular_componentvirion component
K0046718biological_processsymbiont entry into host cell
K0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
K0075606biological_processtransport of viral material towards nucleus
L0005198molecular_functionstructural molecule activity
L0019028cellular_componentviral capsid
L0039623cellular_componentT=25 icosahedral viral capsid
L0042025cellular_componenthost cell nucleus
L0043657cellular_componenthost cell
L0044423cellular_componentvirion component
L0046718biological_processsymbiont entry into host cell
L0075521biological_processmicrotubule-dependent intracellular transport of viral material towards nucleus
L0075606biological_processtransport of viral material towards nucleus
M0005198molecular_functionstructural molecule activity
M0019028cellular_componentviral capsid
M0019062biological_processvirion attachment to host cell
M0039623cellular_componentT=25 icosahedral viral capsid
M0042025cellular_componenthost cell nucleus
M0044423cellular_componentvirion component
M0046718biological_processsymbiont entry into host cell
M0075509biological_processendocytosis involved in viral entry into host cell
M0075512biological_processclathrin-dependent endocytosis of virus by host cell
N0019028cellular_componentviral capsid
N0042025cellular_componenthost cell nucleus
N0044423cellular_componentvirion component
N0098021cellular_componentviral capsid, decoration
O0019028cellular_componentviral capsid
O0031423molecular_functionhexon binding
O0042025cellular_componenthost cell nucleus
O0044423cellular_componentvirion component
P0019028cellular_componentviral capsid
P0031423molecular_functionhexon binding
P0042025cellular_componenthost cell nucleus
P0044423cellular_componentvirion component
Q0019028cellular_componentviral capsid
Q0031423molecular_functionhexon binding
Q0042025cellular_componenthost cell nucleus
Q0044423cellular_componentvirion component
Q0046718biological_processsymbiont entry into host cell
Q0098021cellular_componentviral capsid, decoration
R0019028cellular_componentviral capsid
R0031423molecular_functionhexon binding
R0042025cellular_componenthost cell nucleus
R0044423cellular_componentvirion component
R0046718biological_processsymbiont entry into host cell
R0098021cellular_componentviral capsid, decoration
S0019028cellular_componentviral capsid
S0031423molecular_functionhexon binding
S0042025cellular_componenthost cell nucleus
S0044423cellular_componentvirion component
S0046718biological_processsymbiont entry into host cell
S0098021cellular_componentviral capsid, decoration
T0019028cellular_componentviral capsid
T0031423molecular_functionhexon binding
T0042025cellular_componenthost cell nucleus
T0044423cellular_componentvirion component
T0046718biological_processsymbiont entry into host cell
T0098021cellular_componentviral capsid, decoration
U0019028cellular_componentviral capsid
U0039664biological_processlysis of host organelle involved in viral entry into host cell
V0019028cellular_componentviral capsid
V0039664biological_processlysis of host organelle involved in viral entry into host cell
X0019028cellular_componentviral capsid
X0039664biological_processlysis of host organelle involved in viral entry into host cell
Y0019028cellular_componentviral capsid
Y0039664biological_processlysis of host organelle involved in viral entry into host cell
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsSite: {"description":"Involved in interaction with pre-protein VI","evidences":[{"source":"HAMAP-Rule","id":"MF_04051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues12
DetailsModified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues12
DetailsModified residue: {"description":"Phosphotyrosine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues5
DetailsModified residue: {"description":"N-acetylalanine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues10
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine; by host","evidences":[{"source":"UniProtKB","id":"P03279","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_04047","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues138
DetailsPeptide: {"description":"Hexon-linking protein-C","featureId":"PRO_0000036496","evidences":[{"source":"HAMAP-Rule","id":"MF_04049","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04049","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04049","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues108
DetailsCoiled coil: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04050","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues4
DetailsMotif: {"description":"Nuclear localization signal","evidences":[{"source":"HAMAP-Rule","id":"MF_04048","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues13
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04048","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04048","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

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PDB entries from 2025-12-24

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