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6B07

Crystal structure of CfFPPS2, a lepidopteran type-II farnesyl diphosphate synthase, complexed with [1-phosphono-2-(1-propylpyridin-2-yl)ethyl]phosphonic acid (inhibitor 1d)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
B0004659molecular_functionprenyltransferase activity
B0008299biological_processisoprenoid biosynthetic process
B0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
C0004659molecular_functionprenyltransferase activity
C0008299biological_processisoprenoid biosynthetic process
C0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues24
Detailsbinding site for residue C6M A 401
ChainResidue
AARG104
AGLN284
AASP287
ALYS301
AMG402
AMG403
AMG404
AHOH528
AHOH545
AHOH559
AHOH564
AASP147
AHOH567
AHOH571
AHOH579
AHOH645
AHOH680
AASP151
AARG156
AGLN215
ALYS244
ATHR245
ATYR248
APHE283

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 402
ChainResidue
AASP147
AASP151
AC6M401
AMG403
AHOH536
AHOH545
AHOH703

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 403
ChainResidue
AASP147
AASP151
AC6M401
AMG402
AHOH528
AHOH680

site_idAC4
Number of Residues5
Detailsbinding site for residue MG A 404
ChainResidue
AASP287
AC6M401
AHOH559
AHOH564
AHOH645

site_idAC5
Number of Residues4
Detailsbinding site for residue EDO A 405
ChainResidue
AGLU84
AHOH538
BARG236
BHOH654

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 406
ChainResidue
AMET317
AGLN320
AHOH501
AHOH628
BGLN320
BARG321

site_idAC7
Number of Residues25
Detailsbinding site for residue C6M B 401
ChainResidue
BARG104
BASP147
BASP151
BARG156
BGLN215
BLYS244
BTHR245
BTYR248
BPHE283
BGLN284
BASP287
BLYS301
BMG402
BMG403
BMG404
BHOH525
BHOH534
BHOH544
BHOH568
BHOH595
BHOH598
BHOH609
BHOH617
BHOH653
BHOH710

site_idAC8
Number of Residues7
Detailsbinding site for residue MG B 402
ChainResidue
BASP147
BASP151
BC6M401
BMG403
BHOH534
BHOH596
BHOH710

site_idAC9
Number of Residues6
Detailsbinding site for residue MG B 403
ChainResidue
BASP147
BASP151
BC6M401
BMG402
BHOH525
BHOH653

site_idAD1
Number of Residues5
Detailsbinding site for residue MG B 404
ChainResidue
BASP287
BC6M401
BHOH568
BHOH609
BHOH617

site_idAD2
Number of Residues3
Detailsbinding site for residue EDO B 405
ChainResidue
BPRO377
BSER378
BGLU379

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO B 406
ChainResidue
AHOH723
BGLU84
BHOH538
AARG236

site_idAD4
Number of Residues24
Detailsbinding site for residue C6M C 401
ChainResidue
CASP147
CASP151
CARG156
CGLN215
CLYS244
CTHR245
CTYR248
CPHE283
CGLN284
CASP287
CLYS301
CMG402
CMG403
CMG404
CHOH518
CHOH534
CHOH539
CHOH556
CHOH571
CHOH572
CHOH592
CHOH648
CHOH657
CHOH663

site_idAD5
Number of Residues7
Detailsbinding site for residue MG C 402
ChainResidue
CASP147
CASP151
CC6M401
CMG403
CHOH518
CHOH568
CHOH663

site_idAD6
Number of Residues6
Detailsbinding site for residue MG C 403
ChainResidue
CASP147
CASP151
CC6M401
CMG402
CHOH534
CHOH657

site_idAD7
Number of Residues5
Detailsbinding site for residue MG C 404
ChainResidue
CASP287
CC6M401
CHOH571
CHOH572
CHOH592

site_idAD8
Number of Residues7
Detailsbinding site for residue EDO C 405
ChainResidue
CTYR95
CASN96
CASP148
CCYS161
CTRP162
CHOH523
CHOH564

site_idAD9
Number of Residues2
Detailsbinding site for residue EDO C 406
ChainResidue
CGLU84
CHOH632

site_idAE1
Number of Residues4
Detailsbinding site for residue EDO C 407
ChainResidue
CPHE184
CASN205
CGLU206
CHOH629

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. IGkfFQIqDDYiD
ChainResidueDetails
AILE279-ASP291

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. VMlDDim..DgsttRRG
ChainResidueDetails
AVAL144-GLY158

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PDB entries from 2024-07-31

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