6AYA
Structure of the native full-length HIV-1 capsid protein in complex with Nup153 peptide
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016032 | biological_process | viral process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | binding site for residue IOD A 301 |
| Chain | Residue |
| A | GLN95 |
| A | LYS158 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | binding site for residue IOD A 303 |
| Chain | Residue |
| A | ARG162 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | binding site for residue IOD A 304 |
| Chain | Residue |
| A | ARG18 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | binding site for residue IOD A 305 |
| Chain | Residue |
| A | LYS182 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | binding site for residue IOD A 306 |
| Chain | Residue |
| A | PRO17 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 308 |
| Chain | Residue |
| A | PHE161 |
| A | ARG162 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 309 |
| Chain | Residue |
| A | ILE153 |
| A | ARG167 |
| A | HOH449 |
| A | PRO93 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 38 |
| Details | Region: {"description":"Interaction with human PPIA/CYPA and NUP153","evidences":[{"source":"PubMed","id":"24130490","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8980234","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Region: {"description":"PPIA/CYPA-binding loop","evidences":[{"source":"UniProtKB","id":"P04591","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine; by host MAPK1","evidences":[{"source":"PubMed","id":"24509437","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Repeat: {"description":"29","evidences":[{"evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
