6AQ3
Crystal structure of a trafficking protein particle complex subunit 3 from Naegleria fowleri covalently bound to palmitic acid
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005783 | cellular_component | endoplasmic reticulum |
| A | 0005794 | cellular_component | Golgi apparatus |
| A | 0016192 | biological_process | vesicle-mediated transport |
| A | 0016236 | biological_process | macroautophagy |
| A | 0030008 | cellular_component | TRAPP complex |
| A | 0048193 | biological_process | Golgi vesicle transport |
| B | 0005783 | cellular_component | endoplasmic reticulum |
| B | 0005794 | cellular_component | Golgi apparatus |
| B | 0016192 | biological_process | vesicle-mediated transport |
| B | 0016236 | biological_process | macroautophagy |
| B | 0030008 | cellular_component | TRAPP complex |
| B | 0048193 | biological_process | Golgi vesicle transport |
| C | 0005783 | cellular_component | endoplasmic reticulum |
| C | 0005794 | cellular_component | Golgi apparatus |
| C | 0016192 | biological_process | vesicle-mediated transport |
| C | 0016236 | biological_process | macroautophagy |
| C | 0030008 | cellular_component | TRAPP complex |
| C | 0048193 | biological_process | Golgi vesicle transport |
| D | 0005783 | cellular_component | endoplasmic reticulum |
| D | 0005794 | cellular_component | Golgi apparatus |
| D | 0016192 | biological_process | vesicle-mediated transport |
| D | 0016236 | biological_process | macroautophagy |
| D | 0030008 | cellular_component | TRAPP complex |
| D | 0048193 | biological_process | Golgi vesicle transport |
| E | 0005783 | cellular_component | endoplasmic reticulum |
| E | 0005794 | cellular_component | Golgi apparatus |
| E | 0016192 | biological_process | vesicle-mediated transport |
| E | 0016236 | biological_process | macroautophagy |
| E | 0030008 | cellular_component | TRAPP complex |
| E | 0048193 | biological_process | Golgi vesicle transport |
| F | 0005783 | cellular_component | endoplasmic reticulum |
| F | 0005794 | cellular_component | Golgi apparatus |
| F | 0016192 | biological_process | vesicle-mediated transport |
| F | 0016236 | biological_process | macroautophagy |
| F | 0030008 | cellular_component | TRAPP complex |
| F | 0048193 | biological_process | Golgi vesicle transport |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue PLM A 201 |
| Chain | Residue |
| A | PHE63 |
| A | CYS74 |
| A | THR80 |
| A | ALA88 |
| A | VAL142 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 202 |
| Chain | Residue |
| A | ARG58 |
| C | ASP120 |
| C | VAL122 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue EDO A 203 |
| Chain | Residue |
| A | PHE77 |
| A | LYS78 |
| A | GLN106 |
| A | TYR178 |
| A | GLU76 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 202 |
| Chain | Residue |
| B | ARG58 |
| D | ALA24 |
| D | ASP120 |
| D | VAL122 |
| D | HOH310 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 203 |
| Chain | Residue |
| B | GLU76 |
| B | PHE77 |
| B | LYS78 |
| B | TYR178 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 204 |
| Chain | Residue |
| B | ALA24 |
| B | ASP120 |
| B | VAL122 |
| D | ARG58 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue EDO C 202 |
| Chain | Residue |
| C | GLU76 |
| C | PHE77 |
| C | LYS78 |
| C | GLN106 |
| C | TYR178 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue EDO D 202 |
| Chain | Residue |
| D | GLU76 |
| D | LYS78 |
| D | GLN106 |
| D | TYR178 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | binding site for residue EDO E 202 |
| Chain | Residue |
| E | PHE77 |
| E | LYS78 |
| E | GLN106 |
| E | LEU175 |
| E | TYR178 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue EDO E 203 |
| Chain | Residue |
| E | ALA24 |
| E | MET25 |
| E | ASP120 |
| E | HOH302 |
| E | HOH312 |
| F | ARG58 |
| site_id | AD2 |
| Number of Residues | 4 |
| Details | binding site for residue EDO F 201 |
| Chain | Residue |
| E | ARG58 |
| F | ALA24 |
| F | ASP120 |
| F | VAL122 |
| site_id | AD3 |
| Number of Residues | 6 |
| Details | binding site for residue EDO F 203 |
| Chain | Residue |
| B | ARG180 |
| F | GLU76 |
| F | PHE77 |
| F | LYS78 |
| F | GLN106 |
| F | TYR178 |
