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6AK9

Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Cytosine and Incoming Ca-8oxodGTP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue CA A 501
ChainResidue
AASP330
AASP332
A8DG503
AHOH788

site_idAC2
Number of Residues6
Detailsbinding site for residue CA A 502
ChainResidue
PHOH107
AASP330
AASP332
AASP418
A8DG503
PDA4

site_idAC3
Number of Residues24
Detailsbinding site for residue 8DG A 503
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AGLY433
ATRP434
AGLY436
ALYS438
AARG445
ACA501
ACA502
AHOH602
AHOH667
AHOH690
AHOH757
AHOH777
AHOH788
PDA4
PHOH107
TDC5

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 504
ChainResidue
ATHR241
AILE243
AVAL246
AHOH856
PDT3
PHOH115

site_idAC5
Number of Residues5
Detailsbinding site for residue EPE A 505
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH631
AHOH701

site_idAC6
Number of Residues8
Detailsbinding site for residue EDO A 506
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
ASER458
AHOH605
AHOH690
PDA4

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 507
ChainResidue
APRO190
ASER191
APRO192
AGLN198

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 508
ChainResidue
ACYS180
ALYS438
AARG442
AHOH758

site_idAC9
Number of Residues2
Detailsbinding site for residue EDO A 509
ChainResidue
AHOH610
AHOH796

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

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PDB entries from 2024-07-24

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