6AJF
Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003796 | molecular_function | lysozyme activity |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0008152 | biological_process | metabolic process |
| A | 0009253 | biological_process | peptidoglycan catabolic process |
| A | 0016020 | cellular_component | membrane |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0016998 | biological_process | cell wall macromolecule catabolic process |
| A | 0030430 | cellular_component | host cell cytoplasm |
| A | 0031640 | biological_process | killing of cells of another organism |
| A | 0042742 | biological_process | defense response to bacterium |
| A | 0044659 | biological_process | viral release from host cell by cytolysis |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | binding site for residue MHA A 1001 |
| Chain | Residue |
| A | ASP759 |
| A | THR891 |
| A | PRO892 |
| A | ASN893 |
| A | ARG894 |
| A | ILE917 |
| A | LYS918 |
| A | ALA919 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue MHA A 1002 |
| Chain | Residue |
| A | PHE863 |
| A | THR864 |
| A | ASN865 |
| A | SER866 |
| A | ASN881 |
| A | GLY862 |
| site_id | AC3 |
| Number of Residues | 10 |
| Details | binding site for residue L6T A 1003 |
| Chain | Residue |
| A | GLN40 |
| A | TYR44 |
| A | SER54 |
| A | LEU55 |
| A | ASP58 |
| A | ARG63 |
| A | ASP64 |
| A | ASP144 |
| A | LEU171 |
| A | ILE427 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue L6T A 1004 |
| Chain | Residue |
| A | ARG188 |
| A | ALA192 |
| A | ASN621 |
| A | GLY691 |
| A | PHE695 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | binding site for residue L6T A 1005 |
| Chain | Residue |
| A | THR66 |
| A | SER67 |
| A | VAL70 |
| A | VAL109 |
| A | MET125 |
| A | GLY170 |
| A | LEU171 |
| A | GLN442 |
| A | ARG453 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | binding site for residue L6T A 1006 |
| Chain | Residue |
| A | PHE235 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 131 |
| Details | TOPO_DOM: Cytoplasmic => ECO:0000305|PubMed:30682372, ECO:0000305|PubMed:31113875 |
| Chain | Residue | Details |
| A | MET1-TYR14 | |
| A | VAL262-VAL290 | |
| A | ALA339-PRO401 | |
| A | PRO589-LYS591 | |
| A | SER652-LEU678 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 240 |
| Details | TRANSMEM: Helical => ECO:0000255 |
| Chain | Residue | Details |
| A | ILE15-GLY35 | |
| A | MET631-VAL651 | |
| A | ILE679-VAL699 | |
| A | LEU704-VAL724 | |
| A | VAL197-ILE217 | |
| A | GLY218-VAL238 | |
| A | PHE241-ILE261 | |
| A | VAL291-PHE311 | |
| A | ALA318-LEU338 | |
| A | ILE402-LEU422 | |
| A | ALA568-LEU588 | |
| A | ALA592-VAL612 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 330 |
| Details | TOPO_DOM: Periplasmic => ECO:0000305|PubMed:30682372, ECO:0000305|PubMed:31113875 |
| Chain | Residue | Details |
| A | ASN36-LEU196 | |
| A | HIS239-PHE240 | |
| A | LEU312-TYR317 | |
| A | SER423-MET567 | |
| A | ASP613-PRO630 | |
| A | MET700-TYR703 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31113875, ECO:0007744|PDB:6OR2 |
| Chain | Residue | Details |
| A | GLN40 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:30682372, ECO:0007744|PDB:6AJG |
| Chain | Residue | Details |
| A | ASP645 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 3 |
| Details | SITE: Part of the proton-transportation channel => ECO:0000305|PubMed:30682372, ECO:0000305|PubMed:31113875 |
| Chain | Residue | Details |
| A | ASP256 | |
| A | TYR257 | |
| A | TYR646 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | SITE: Part of the proton transportation network => ECO:0000305|PubMed:31113875 |
| Chain | Residue | Details |
| A | LYS591 | |
| A | GLU647 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | SITE: Part of the proton-transportation channel => ECO:0000305|PubMed:30682372, ECO:0000305|PubMed:31113875, ECO:0000305|PubMed:32512002 |
| Chain | Residue | Details |
| A | ASP645 |
