Functional Information from GO Data
Chain | GOid | namespace | contents |
Z | 0000166 | molecular_function | nucleotide binding |
Z | 0002101 | biological_process | tRNA wobble cytosine modification |
Z | 0003676 | molecular_function | nucleic acid binding |
Z | 0005524 | molecular_function | ATP binding |
Z | 0005737 | cellular_component | cytoplasm |
Z | 0008033 | biological_process | tRNA processing |
Z | 0016874 | molecular_function | ligase activity |
Z | 0016879 | molecular_function | ligase activity, forming carbon-nitrogen bonds |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN Z 501 |
Chain | Residue |
Z | CYS352 |
Z | CYS355 |
Z | CYS370 |
Z | CYS373 |
site_id | AC2 |
Number of Residues | 21 |
Details | binding site for residue ACP Z 502 |
Chain | Residue |
Z | ASN46 |
Z | TYR51 |
Z | ARG54 |
Z | GLY55 |
Z | ASN56 |
Z | GLY57 |
Z | ALA112 |
Z | ASP115 |
Z | VAL116 |
Z | LEU117 |
Z | ARG140 |
Z | GLY141 |
Z | ILE143 |
Z | GLY144 |
Z | MG507 |
Z | MG508 |
Z | ASP8 |
Z | ASP9 |
Z | ASP11 |
Z | TPO18 |
Z | LEU45 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue AG2 Z 503 |
Chain | Residue |
Z | GLU159 |
Z | ASP193 |
Z | ASN194 |
Z | VAL203 |
Z | CYS204 |
Z | GLY215 |
Z | ARG217 |
Z | SER399 |
site_id | AC4 |
Number of Residues | 1 |
Details | binding site for residue ACT Z 504 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue ACT Z 505 |
Chain | Residue |
Z | ARG41 |
Z | GLY150 |
Z | ALA151 |
Z | NH4506 |
site_id | AC6 |
Number of Residues | 4 |
Details | binding site for residue NH4 Z 506 |
Chain | Residue |
Z | ALA102 |
Z | VAL103 |
Z | GLY150 |
Z | ACT505 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue MG Z 507 |
Chain | Residue |
Z | ASP9 |
Z | THR10 |
Z | ASP11 |
Z | TPO18 |
Z | ACP502 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue MG Z 508 |
Chain | Residue |
Z | ASP8 |
Z | ASP9 |
Z | TPO18 |
Z | GLY57 |
Z | ALA58 |
Z | ACP502 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 61 |
Details | DNA_BIND: OB |
Chain | Residue | Details |
Z | ARG268-ASP329 | |