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6AGG

Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)

Functional Information from GO Data
ChainGOidnamespacecontents
Z0000166molecular_functionnucleotide binding
Z0002101biological_processtRNA wobble cytosine modification
Z0003676molecular_functionnucleic acid binding
Z0005524molecular_functionATP binding
Z0005737cellular_componentcytoplasm
Z0008033biological_processtRNA processing
Z0016874molecular_functionligase activity
Z0016879molecular_functionligase activity, forming carbon-nitrogen bonds
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN Z 501
ChainResidue
ZCYS352
ZCYS355
ZCYS370
ZCYS373

site_idAC2
Number of Residues21
Detailsbinding site for residue ACP Z 502
ChainResidue
ZASN46
ZTYR51
ZARG54
ZGLY55
ZASN56
ZGLY57
ZALA112
ZASP115
ZVAL116
ZLEU117
ZARG140
ZGLY141
ZILE143
ZGLY144
ZMG507
ZMG508
ZASP8
ZASP9
ZASP11
ZTPO18
ZLEU45

site_idAC3
Number of Residues8
Detailsbinding site for residue AG2 Z 503
ChainResidue
ZGLU159
ZASP193
ZASN194
ZVAL203
ZCYS204
ZGLY215
ZARG217
ZSER399

site_idAC4
Number of Residues1
Detailsbinding site for residue ACT Z 504
ChainResidue
ZARG268

site_idAC5
Number of Residues4
Detailsbinding site for residue ACT Z 505
ChainResidue
ZARG41
ZGLY150
ZALA151
ZNH4506

site_idAC6
Number of Residues4
Detailsbinding site for residue NH4 Z 506
ChainResidue
ZALA102
ZVAL103
ZGLY150
ZACT505

site_idAC7
Number of Residues5
Detailsbinding site for residue MG Z 507
ChainResidue
ZASP9
ZTHR10
ZASP11
ZTPO18
ZACP502

site_idAC8
Number of Residues6
Detailsbinding site for residue MG Z 508
ChainResidue
ZASP8
ZASP9
ZTPO18
ZGLY57
ZALA58
ZACP502

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues61
DetailsDNA_BIND: OB
ChainResidueDetails
ZARG268-ASP329

218853

PDB entries from 2024-04-24

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