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6AFW

Proton pyrophosphatase-T228D mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0004427molecular_functioninorganic diphosphate phosphatase activity
A0005773cellular_componentvacuole
A0005774cellular_componentvacuolar membrane
A0009678molecular_functiondiphosphate hydrolysis-driven proton transmembrane transporter activity
A0016020cellular_componentmembrane
A0046872molecular_functionmetal ion binding
A1902600biological_processproton transmembrane transport
B0004427molecular_functioninorganic diphosphate phosphatase activity
B0005773cellular_componentvacuole
B0005774cellular_componentvacuolar membrane
B0009678molecular_functiondiphosphate hydrolysis-driven proton transmembrane transporter activity
B0016020cellular_componentmembrane
B0046872molecular_functionmetal ion binding
B1902600biological_processproton transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue PO4 A 1001
ChainResidue
ALYS250
AASP731
APO41002
AMG1005
AMG1006
AMG1007
AK1008
AHOH1115
AHOH1146
AHOH1247
AHOH1281
AASP253
AASP283
AASP287
AASP507
AASN534
AASP691
AASP727
ALYS730

site_idAC2
Number of Residues19
Detailsbinding site for residue PO4 A 1002
ChainResidue
AASP253
AGLU268
AASP507
AASP691
ALYS694
APO41001
AMG1003
AMG1004
AMG1005
AMG1006
AMG1007
AHOH1107
AHOH1114
AHOH1115
AHOH1142
AHOH1146
AHOH1152
AHOH1162
AHOH1167

site_idAC3
Number of Residues7
Detailsbinding site for residue MG A 1003
ChainResidue
AASP253
AASP257
APO41002
AMG1005
AHOH1114
AHOH1142
AHOH1196

site_idAC4
Number of Residues7
Detailsbinding site for residue MG A 1004
ChainResidue
AASP507
APO41002
AMG1006
AHOH1107
AHOH1133
AHOH1162
AHOH1232

site_idAC5
Number of Residues8
Detailsbinding site for residue MG A 1005
ChainResidue
AASP253
AASP727
ALYS730
APO41001
APO41002
AMG1003
AHOH1115
AHOH1142

site_idAC6
Number of Residues7
Detailsbinding site for residue MG A 1006
ChainResidue
AASP283
AASP507
APO41001
APO41002
AMG1004
AHOH1107
AHOH1167

site_idAC7
Number of Residues6
Detailsbinding site for residue MG A 1007
ChainResidue
AASN534
AASP691
APO41001
APO41002
AHOH1146
AHOH1152

site_idAC8
Number of Residues7
Detailsbinding site for residue K A 1008
ChainResidue
AGLY533
AASN534
APO41001
AHOH1146
AHOH1218
AHOH1247
AHOH1281

site_idAC9
Number of Residues3
Detailsbinding site for residue 1PG A 1009
ChainResidue
ATRP588
AMET592
ATHR652

site_idAD1
Number of Residues3
Detailsbinding site for residue 1PG A 1010
ChainResidue
ALYS397
AHOH1282
BPHE763

site_idAD2
Number of Residues3
Detailsbinding site for residue 1PG A 1011
ChainResidue
APHE766
BPHE471
B1PG1010

site_idAD3
Number of Residues2
Detailsbinding site for residue 1PG A 1012
ChainResidue
AASP636
ALYS640

site_idAD4
Number of Residues1
Detailsbinding site for residue 1PG A 1013
ChainResidue
AVAL421

site_idAD5
Number of Residues18
Detailsbinding site for residue PO4 B 1001
ChainResidue
BASP727
BLYS730
BASP731
BPO41002
BMG1005
BMG1006
BMG1007
BK1008
BHOH1128
BHOH1152
BHOH1231
BLYS250
BASP253
BASP283
BASP287
BASP507
BASN534
BASP691

site_idAD6
Number of Residues19
Detailsbinding site for residue PO4 B 1002
ChainResidue
BASP253
BGLU268
BASP507
BASP691
BLYS694
BPO41001
BMG1003
BMG1004
BMG1005
BMG1006
BMG1007
BHOH1110
BHOH1112
BHOH1141
BHOH1152
BHOH1163
BHOH1167
BHOH1220
BHOH1234

site_idAD7
Number of Residues7
Detailsbinding site for residue MG B 1003
ChainResidue
BASP253
BASP257
BPO41002
BMG1005
BHOH1110
BHOH1131
BHOH1141

site_idAD8
Number of Residues7
Detailsbinding site for residue MG B 1004
ChainResidue
BASP507
BPO41002
BMG1006
BHOH1112
BHOH1119
BHOH1163
BHOH1220

site_idAD9
Number of Residues8
Detailsbinding site for residue MG B 1005
ChainResidue
BASP253
BASP727
BLYS730
BPO41001
BPO41002
BMG1003
BHOH1128
BHOH1141

site_idAE1
Number of Residues7
Detailsbinding site for residue MG B 1006
ChainResidue
BASP283
BASP507
BPO41001
BPO41002
BMG1004
BHOH1112
BHOH1234

site_idAE2
Number of Residues7
Detailsbinding site for residue MG B 1007
ChainResidue
BASN534
BASP691
BPO41001
BPO41002
BK1008
BHOH1152
BHOH1167

site_idAE3
Number of Residues6
Detailsbinding site for residue K B 1008
ChainResidue
BASN534
BPO41001
BMG1007
BHOH1152
BHOH1219
BHOH1231

site_idAE4
Number of Residues1
Detailsbinding site for residue 1PG B 1009
ChainResidue
BTHR652

site_idAE5
Number of Residues3
Detailsbinding site for residue 1PG B 1010
ChainResidue
APHE660
ATHR664
A1PG1011

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues148
DetailsTOPO_DOM: Intravacuolar => ECO:0000305|PubMed:22456709
ChainResidueDetails
AGLY2-ASP8
AGLU115-ALA135
AGLY217-ASP219
ASER313-GLU320
AALA383-SER401
ASER473-ALA478
ASER564-PRO573
AGLY759-ILE765
BGLY2-ASP8
BGLU115-ALA135
BGLY217-ASP219
BSER313-GLU320
BALA383-SER401
BSER473-ALA478
BSER564-PRO573
BGLY759-ILE765
AGLY661
BGLY661

site_idSWS_FT_FI2
Number of Residues850
DetailsTRANSMEM: Helical
ChainResidueDetails
ALEU9-LYS35
AALA85-VAL114
ALEU136-ILE163
APHE187-TYR216
ATRP220-TYR248
AASP287-ILE312
ALEU321-THR346
ALYS355-VAL382
ATRP402-TYR425
AMET479-ILE505
ATHR535-ALA563
ALYS574-LEU602
ALYS632-PHE660
AVAL662-ALA689
ASER733-HIS758
BLEU9-LYS35
BALA85-VAL114
BLEU136-ILE163
BPHE187-TYR216
BTRP220-TYR248
BASP287-ILE312
BLEU321-THR346
BLYS355-VAL382
BTRP402-TYR425
BVAL448-VAL472
BMET479-ILE505
BTHR535-ALA563
BLYS574-LEU602
BLYS632-PHE660
BVAL662-ALA689
BSER733-HIS758
AVAL448-VAL472

site_idSWS_FT_FI3
Number of Residues466
DetailsTOPO_DOM: Cytoplasmic => ECO:0000305|PubMed:22456709
ChainResidueDetails
AVAL36-GLY84
AALA164-ALA186
ATHR249-GLY286
AASP347-VAL354
ATHR426-ASN447
ASER506-ASN534
ALYS603-VAL631
ATRP690-THR732
BVAL36-GLY84
BALA164-ALA186
BTHR249-GLY286
BASP347-VAL354
BTHR426-ASN447
BSER506-ASN534
BLYS603-VAL631
BTRP690-THR732

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING:
ChainResidueDetails
ALYS250
ALYS730
BLYS250
BLYS730

site_idSWS_FT_FI5
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:22456709
ChainResidueDetails
AASP283
AASP507
AASN534
AASP691
AASP727
BASP253
BASP257
BASP283
BASP507
BASN534
BASP691
BASP727
AASP253
AASP257

site_idSWS_FT_FI6
Number of Residues12
DetailsSITE: Important for proton transport => ECO:0000305
ChainResidueDetails
AASP731
ALYS742
BARG242
BASP287
BASP294
BGLU301
BASP731
BLYS742
AARG242
AASP287
AASP294
AGLU301

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PDB entries from 2024-06-12

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