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6AB8

Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with ZLys

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AATP504
AHOH613
AHOH697
AHOH704
AHOH743

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 502
ChainResidue
AHOH656
AHOH703
AGLU396
ASER399
AMG503
AATP504

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 503
ChainResidue
AGLU396
AMG502
AATP504
AHOH656
AHOH750
AHOH769

site_idAC4
Number of Residues27
Detailsbinding site for residue ATP A 504
ChainResidue
AARG330
AGLU332
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398
ASER399
AGLY421
AGLY423
AARG426
AMG501
AMG502
AMG503
A9VC505
AHOH613
AHOH629
AHOH656
AHOH691
AHOH697
AHOH703
AHOH704
AHOH724
AHOH736
AHOH743

site_idAC5
Number of Residues9
Detailsbinding site for residue 9VC A 505
ChainResidue
AALA306
AASN346
APHE384
ASER399
ATRP417
AGLY421
AATP504
A9VC506
AHOH672

site_idAC6
Number of Residues13
Detailsbinding site for residue 9VC A 506
ChainResidue
AMET276
AALA302
AASN346
ACYS348
APHE384
ASER399
AVAL401
ALEU407
AASP408
ATRP411
ATRP417
AGLY419
A9VC505

site_idAC7
Number of Residues4
Detailsbinding site for residue K A 507
ChainResidue
APRO204
AASP206
AGLU207
AHOH710

site_idAC8
Number of Residues3
Detailsbinding site for residue K A 508
ChainResidue
AGLU341
AARG442
AHOH756

218500

PDB entries from 2024-04-17

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