Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6A8A

Ribokinase from Leishmania donovani with ATP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004747molecular_functionribokinase activity
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006014biological_processD-ribose metabolic process
A0016301molecular_functionkinase activity
A0019303biological_processD-ribose catabolic process
A0046835biological_processcarbohydrate phosphorylation
A0046872molecular_functionmetal ion binding
B0004747molecular_functionribokinase activity
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006014biological_processD-ribose metabolic process
B0016301molecular_functionkinase activity
B0019303biological_processD-ribose catabolic process
B0046835biological_processcarbohydrate phosphorylation
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue GOL A 401
ChainResidue
AASP27
AGLY52
AGLY53
ALYS54
AASN57
ATHR314
AHOH505
AHOH521

site_idAC2
Number of Residues10
Detailsbinding site for residue GOL A 402
ChainResidue
AVAL45
ASER46
APHE47
AHOH537
BCYS125
BPRO126
BASN127
BASN130
BGLU323
ASER44

site_idAC3
Number of Residues21
Detailsbinding site for residue ATP A 403
ChainResidue
AASN209
ATHR245
AGLY247
AALA248
AGLY250
ALYS266
AALA270
ATHR273
AGLY275
AALA276
AGLY277
AASN302
AALA305
AVAL309
AHOH501
AHOH520
AHOH530
AHOH558
AHOH575
AHOH584
AHOH586

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 404
ChainResidue
AASP272
ASER308
AARG311
ASER317
AHOH517
AHOH572

site_idAC5
Number of Residues5
Detailsbinding site for residue NA A 405
ChainResidue
AALA67
AGLY92
AGLU135
AHOH514
AHOH597

site_idAC6
Number of Residues2
Detailsbinding site for residue NA A 406
ChainResidue
APRO162
AHOH514

site_idAC7
Number of Residues2
Detailsbinding site for residue NA A 407
ChainResidue
AARG5
AARG100

site_idAC8
Number of Residues2
Detailsbinding site for residue CL A 408
ChainResidue
ASER105
AASN127

site_idAC9
Number of Residues3
Detailsbinding site for residue CL A 409
ChainResidue
AALA4
AARG5
AARG100

site_idAD1
Number of Residues4
Detailsbinding site for residue CL A 410
ChainResidue
APHE51
AHOH508
AHOH549
AHOH570

site_idAD2
Number of Residues19
Detailsbinding site for residue ATP B 401
ChainResidue
BASN209
BTHR245
BLEU246
BGLY247
BALA248
BGLY250
BLYS266
BALA270
BTHR273
BGLY275
BALA276
BGLY277
BASN302
BALA305
BHOH511
BHOH515
BHOH554
BHOH566
BHOH571

site_idAD3
Number of Residues6
Detailsbinding site for residue NA B 402
ChainResidue
BASP272
BSER308
BARG311
BSER317
BHOH516
BHOH567

site_idAD4
Number of Residues5
Detailsbinding site for residue NA B 403
ChainResidue
BALA67
BGLY92
BGLU135
BHOH543
BHOH583

site_idAD5
Number of Residues3
Detailsbinding site for residue NA B 404
ChainResidue
BPRO134
BPRO162
BHOH543

site_idAD6
Number of Residues2
Detailsbinding site for residue CL B 405
ChainResidue
BARG64
BHIS320

site_idAD7
Number of Residues3
Detailsbinding site for residue CL B 406
ChainResidue
BLEU316
BHOH579
BPHE51

site_idAD8
Number of Residues3
Detailsbinding site for residue CL B 407
ChainResidue
BALA4
BARG5
BARG100

site_idAD9
Number of Residues5
Detailsbinding site for residue CL B 408
ChainResidue
BSER104
BSER105
BASN127
BHOH530
BHOH576

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon