6A59
Structure of histone demethylase REF6 at 1.8A
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1401 |
Chain | Residue |
A | CYS1245 |
A | CYS1250 |
A | HIS1263 |
A | HIS1280 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1402 |
Chain | Residue |
A | CYS1268 |
A | CYS1273 |
A | HIS1286 |
A | HIS1290 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1403 |
Chain | Residue |
A | CYS1303 |
A | HIS1316 |
A | HIS1320 |
A | CYS1298 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue ZN A 1404 |
Chain | Residue |
A | CYS1328 |
A | CYS1333 |
A | HIS1346 |
A | HIS1352 |
Functional Information from PROSITE/UniProt
site_id | PS00028 |
Number of Residues | 23 |
Details | ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. CpikgCgknFfshkylvqHqrv..H |
Chain | Residue | Details |
A | CYS1268-HIS1290 | |
A | CYS1298-HIS1320 | |
A | CYS1328-HIS1352 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 23 |
Details | Zinc finger: {"description":"C2H2-type 1; degenerate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 24 |
Details | Zinc finger: {"description":"C2H2-type 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 24 |
Details | Zinc finger: {"description":"C2H2-type 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 26 |
Details | Zinc finger: {"description":"C2H2-type 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00042","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 73 |
Details | Region: {"description":"DNA-binding","evidences":[{"source":"PubMed","id":"31048693","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32257379","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6A57","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"32257379","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6A57","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A58","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A59","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 8 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"31048693","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32257379","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6A57","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A58","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A59","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 4 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"31048693","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32257379","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6A57","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A58","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6A59","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6JNN","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |