5ZZ8
Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component
This is a non-PDB format compatible entry.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| 1 | 0003677 | molecular_function | DNA binding |
| 1 | 0019069 | biological_process | viral capsid assembly |
| 2 | 0005198 | molecular_function | structural molecule activity |
| 2 | 0019028 | cellular_component | viral capsid |
| 2 | 0042025 | cellular_component | host cell nucleus |
| 3 | 0005198 | molecular_function | structural molecule activity |
| 3 | 0019028 | cellular_component | viral capsid |
| 3 | 0042025 | cellular_component | host cell nucleus |
| A | 0005198 | molecular_function | structural molecule activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| b | 0016032 | biological_process | viral process |
| b | 0019028 | cellular_component | viral capsid |
| b | 0042025 | cellular_component | host cell nucleus |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| B | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| c | 0016032 | biological_process | viral process |
| c | 0019028 | cellular_component | viral capsid |
| c | 0042025 | cellular_component | host cell nucleus |
| C | 0005198 | molecular_function | structural molecule activity |
| C | 0019028 | cellular_component | viral capsid |
| C | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| d | 0016032 | biological_process | viral process |
| d | 0019028 | cellular_component | viral capsid |
| d | 0042025 | cellular_component | host cell nucleus |
| D | 0005198 | molecular_function | structural molecule activity |
| D | 0019028 | cellular_component | viral capsid |
| D | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| e | 0016032 | biological_process | viral process |
| e | 0019028 | cellular_component | viral capsid |
| e | 0042025 | cellular_component | host cell nucleus |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| E | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| f | 0016032 | biological_process | viral process |
| f | 0019028 | cellular_component | viral capsid |
| f | 0042025 | cellular_component | host cell nucleus |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| F | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| g | 0016032 | biological_process | viral process |
| g | 0019028 | cellular_component | viral capsid |
| g | 0042025 | cellular_component | host cell nucleus |
| G | 0005198 | molecular_function | structural molecule activity |
| G | 0019028 | cellular_component | viral capsid |
| G | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| h | 0016032 | biological_process | viral process |
| h | 0019028 | cellular_component | viral capsid |
| h | 0042025 | cellular_component | host cell nucleus |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| H | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| i | 0016032 | biological_process | viral process |
| i | 0019028 | cellular_component | viral capsid |
| i | 0042025 | cellular_component | host cell nucleus |
| I | 0005198 | molecular_function | structural molecule activity |
| I | 0019028 | cellular_component | viral capsid |
| I | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| j | 0016032 | biological_process | viral process |
| j | 0019028 | cellular_component | viral capsid |
| j | 0042025 | cellular_component | host cell nucleus |
| J | 0005198 | molecular_function | structural molecule activity |
| J | 0019028 | cellular_component | viral capsid |
| J | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| k | 0016032 | biological_process | viral process |
| k | 0019028 | cellular_component | viral capsid |
| k | 0042025 | cellular_component | host cell nucleus |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| K | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| l | 0016032 | biological_process | viral process |
| l | 0019028 | cellular_component | viral capsid |
| l | 0042025 | cellular_component | host cell nucleus |
| L | 0005198 | molecular_function | structural molecule activity |
| L | 0019028 | cellular_component | viral capsid |
| L | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| m | 0016032 | biological_process | viral process |
| m | 0019028 | cellular_component | viral capsid |
| m | 0042025 | cellular_component | host cell nucleus |
| M | 0005198 | molecular_function | structural molecule activity |
| M | 0019028 | cellular_component | viral capsid |
| M | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| n | 0016032 | biological_process | viral process |
| n | 0019028 | cellular_component | viral capsid |
| n | 0042025 | cellular_component | host cell nucleus |
| N | 0005198 | molecular_function | structural molecule activity |
| N | 0019028 | cellular_component | viral capsid |
| N | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| o | 0016032 | biological_process | viral process |
| o | 0019028 | cellular_component | viral capsid |
| o | 0042025 | cellular_component | host cell nucleus |
| O | 0005198 | molecular_function | structural molecule activity |
| O | 0019028 | cellular_component | viral capsid |
| O | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| p | 0016032 | biological_process | viral process |
| p | 0019028 | cellular_component | viral capsid |
| p | 0042025 | cellular_component | host cell nucleus |
| P | 0005198 | molecular_function | structural molecule activity |
| P | 0019028 | cellular_component | viral capsid |
| P | 0039622 | cellular_component | T=16 icosahedral viral capsid |
| q | 0019028 | cellular_component | viral capsid |
| q | 0044423 | cellular_component | virion component |
| q | 0051276 | biological_process | chromosome organization |
| Q | 0003677 | molecular_function | DNA binding |
| Q | 0019069 | biological_process | viral capsid assembly |
| r | 0019028 | cellular_component | viral capsid |
| r | 0019072 | biological_process | viral genome packaging |
| r | 0043657 | cellular_component | host cell |
| r | 0046718 | biological_process | symbiont entry into host cell |
| r | 0075732 | biological_process | viral penetration into host nucleus |
| R | 0005198 | molecular_function | structural molecule activity |
| R | 0019028 | cellular_component | viral capsid |
| R | 0042025 | cellular_component | host cell nucleus |
| s | 0019028 | cellular_component | viral capsid |
| s | 0019072 | biological_process | viral genome packaging |
| s | 0043657 | cellular_component | host cell |
| s | 0046718 | biological_process | symbiont entry into host cell |
| s | 0075732 | biological_process | viral penetration into host nucleus |
| S | 0005198 | molecular_function | structural molecule activity |
| S | 0019028 | cellular_component | viral capsid |
| S | 0042025 | cellular_component | host cell nucleus |
| t | 0004843 | molecular_function | cysteine-type deubiquitinase activity |
| t | 0006508 | biological_process | proteolysis |
| t | 0008234 | molecular_function | cysteine-type peptidase activity |
| t | 0019033 | cellular_component | viral tegument |
| t | 0019784 | molecular_function | deNEDDylase activity |
| t | 0030430 | cellular_component | host cell cytoplasm |
| t | 0039648 | biological_process | symbiont-mediated perturbation of host ubiquitin-like protein modification |
| t | 0039693 | biological_process | viral DNA genome replication |
| t | 0042025 | cellular_component | host cell nucleus |
| T | 0003677 | molecular_function | DNA binding |
| T | 0019069 | biological_process | viral capsid assembly |
| u | 0004843 | molecular_function | cysteine-type deubiquitinase activity |
| u | 0006508 | biological_process | proteolysis |
| u | 0008234 | molecular_function | cysteine-type peptidase activity |
| u | 0019033 | cellular_component | viral tegument |
| u | 0019784 | molecular_function | deNEDDylase activity |
| u | 0030430 | cellular_component | host cell cytoplasm |
| u | 0039648 | biological_process | symbiont-mediated perturbation of host ubiquitin-like protein modification |
| u | 0039693 | biological_process | viral DNA genome replication |
| u | 0042025 | cellular_component | host cell nucleus |
| U | 0005198 | molecular_function | structural molecule activity |
| U | 0019028 | cellular_component | viral capsid |
| U | 0042025 | cellular_component | host cell nucleus |
| V | 0005198 | molecular_function | structural molecule activity |
| V | 0019028 | cellular_component | viral capsid |
| V | 0042025 | cellular_component | host cell nucleus |
| w | 0003677 | molecular_function | DNA binding |
| w | 0019069 | biological_process | viral capsid assembly |
| W | 0003677 | molecular_function | DNA binding |
| W | 0019069 | biological_process | viral capsid assembly |
| x | 0005198 | molecular_function | structural molecule activity |
| x | 0019028 | cellular_component | viral capsid |
| x | 0042025 | cellular_component | host cell nucleus |
| X | 0005198 | molecular_function | structural molecule activity |
| X | 0019028 | cellular_component | viral capsid |
| X | 0042025 | cellular_component | host cell nucleus |
| y | 0005198 | molecular_function | structural molecule activity |
| y | 0019028 | cellular_component | viral capsid |
| y | 0042025 | cellular_component | host cell nucleus |
| Y | 0005198 | molecular_function | structural molecule activity |
| Y | 0019028 | cellular_component | viral capsid |
| Y | 0042025 | cellular_component | host cell nucleus |
