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5ZUU

Crystal structure of AtCPSF30 YTH domain in complex with 10mer m6A-modified RNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
B0003723molecular_functionRNA binding
C0003723molecular_functionRNA binding
D0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue GOL A 501
ChainResidue
ACYS331
AGLU332
APRO376
AASP377
ASER378
AHOH602
BASN286
BTHR288

site_idAC2
Number of Residues7
Detailsbinding site for residue EPE B 501
ChainResidue
BASP274
BSER275
BVAL276
BGLU277
CHIS336
CARG339
BPHE273

site_idAC3
Number of Residues19
Detailsbinding site for Di-nucleotide 6MD E 1 and C E 2
ChainResidue
ALYS243
ASER244
AASN245
AASN249
ATRP259
AALA260
AGLN262
AASN286
ATRP310
ATYR319
ALYS352
AILE353
ASER354
AARG355
AASP356
AHOH619
EU3
EHOH102
FG5

site_idAC4
Number of Residues20
Detailsbinding site for Di-nucleotide 6MD F 1 and C F 2
ChainResidue
CLYS243
CSER244
CASN245
CASN249
CTRP259
CALA260
CASN286
CTRP310
CTYR319
CLYS352
CILE353
CSER354
CARG355
CASP356
CHOH516
CHOH522
EG5
FU3
FHOH105
FHOH106

site_idAC5
Number of Residues13
Detailsbinding site for Di-nucleotide 6MD G 1 and C G 2
ChainResidue
DLYS243
DSER244
DASN245
DASN249
DTRP259
DALA260
DGLN262
DASN286
DLYS348
DSER350
DARG351
DASP352
GU3

site_idAC6
Number of Residues18
Detailsbinding site for Di-nucleotide 6MD I 1 and C I 2
ChainResidue
BLYS243
BSER244
BASN245
BASN249
BTRP259
BALA260
BGLN262
BASN286
BTRP310
BTYR319
BLYS352
BILE353
BSER354
BARG355
BASP356
BHOH634
IU3
IHOH102

225946

PDB entries from 2024-10-09

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