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5ZI3

MDH3 wild type, apo-form

Functional Information from GO Data
ChainGOidnamespacecontents
A0003729molecular_functionmRNA binding
A0003824molecular_functioncatalytic activity
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005777cellular_componentperoxisome
A0005782cellular_componentperoxisomal matrix
A0006097biological_processglyoxylate cycle
A0006099biological_processtricarboxylic acid cycle
A0006108biological_processmalate metabolic process
A0006635biological_processfatty acid beta-oxidation
A0006735biological_processNADH regeneration
A0016491molecular_functionoxidoreductase activity
A0016615molecular_functionmalate dehydrogenase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0019752biological_processcarboxylic acid metabolic process
A0030060molecular_functionL-malate dehydrogenase (NAD+) activity
A0044281biological_processsmall molecule metabolic process
A0070013cellular_componentintracellular organelle lumen
B0003729molecular_functionmRNA binding
B0003824molecular_functioncatalytic activity
B0005737cellular_componentcytoplasm
B0005739cellular_componentmitochondrion
B0005777cellular_componentperoxisome
B0005782cellular_componentperoxisomal matrix
B0006097biological_processglyoxylate cycle
B0006099biological_processtricarboxylic acid cycle
B0006108biological_processmalate metabolic process
B0006635biological_processfatty acid beta-oxidation
B0006735biological_processNADH regeneration
B0016491molecular_functionoxidoreductase activity
B0016615molecular_functionmalate dehydrogenase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0019752biological_processcarboxylic acid metabolic process
B0030060molecular_functionL-malate dehydrogenase (NAD+) activity
B0044281biological_processsmall molecule metabolic process
B0070013cellular_componentintracellular organelle lumen
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue GOL B 401
ChainResidue
BLYS138
BPRO139
BGLY140
BASN141
BSER299
BVAL300

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL B 402
ChainResidue
BILE116
BSER117
BASN118
BMET237
BVAL13
BPRO75
BGLY77

Functional Information from PROSITE/UniProt
site_idPS00068
Number of Residues13
DetailsMDH Malate dehydrogenase active site signature. VTNLDlvRAetfL
ChainResidueDetails
AVAL145-LEU157

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"P00346","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues22
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P40926","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10004","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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