Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Z48

Crystal structure of pyrrolidone carboxylate peptidase I from Deinococcus radiodurans R1 bound to pyroglutamate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
A0016920molecular_functionpyroglutamyl-peptidase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006508biological_processproteolysis
B0008234molecular_functioncysteine-type peptidase activity
B0016920molecular_functionpyroglutamyl-peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue NA A 301
ChainResidue
AGLY-1
AMET1
AHOH436
AHOH539
AHOH550
AHOH559

site_idAC2
Number of Residues5
Detailsbinding site for residue NA A 302
ChainResidue
BARG120
BHOH447
AASP89
AGLN91
AARG101

site_idAC3
Number of Residues4
Detailsbinding site for residue DMS A 303
ChainResidue
AALA115
ALEU117
ALEU119
AHOH404

site_idAC4
Number of Residues5
Detailsbinding site for residue DMS A 304
ChainResidue
AGLU26
AHIS28
AHOH458
BGLN25
BLEU42

site_idAC5
Number of Residues11
Detailsbinding site for residue PCA A 305
ChainResidue
APHE9
APHE12
AASN18
AGLY70
ALEU71
ATYR142
AVAL143
ACYS144
AHIS169
AHOH460
AHOH547

site_idAC6
Number of Residues4
Detailsbinding site for residue DMS B 301
ChainResidue
BALA115
BLEU117
BLEU119
BHOH402

site_idAC7
Number of Residues11
Detailsbinding site for residue PCA B 302
ChainResidue
BPHE9
BPHE12
BASN18
BGLY70
BLEU71
BTYR142
BVAL143
BCYS144
BHIS169
BHOH458
BHOH484

Functional Information from PROSITE/UniProt
site_idPS01333
Number of Residues17
DetailsPYRASE_GLU Pyrrolidone-carboxylate peptidase glutamic acid active site. GlaAgrpqVTlERVGvG
ChainResidueDetails
AGLY70-GLY86

site_idPS01334
Number of Residues15
DetailsPYRASE_CYS Pyrrolidone-carboxylate peptidase cysteine active site. IpGdISnSAGlYVCN
ChainResidueDetails
AILE131-ASN145

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AGLU81
ACYS144
AHIS169
BGLU81
BCYS144
BHIS169

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon