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5Z0B

Crystal structure of plasma-derived human serum albumin

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0005504molecular_functionfatty acid binding
A0005507molecular_functioncopper ion binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0005788cellular_componentendoplasmic reticulum lumen
A0005794cellular_componentGolgi apparatus
A0008289molecular_functionlipid binding
A0009267biological_processcellular response to starvation
A0015643molecular_functiontoxic substance binding
A0016209molecular_functionantioxidant activity
A0019825molecular_functionoxygen binding
A0030170molecular_functionpyridoxal phosphate binding
A0031093cellular_componentplatelet alpha granule lumen
A0032991cellular_componentprotein-containing complex
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0051087molecular_functionprotein-folding chaperone binding
A0051902biological_processnegative regulation of mitochondrial depolarization
A0070062cellular_componentextracellular exosome
A0072562cellular_componentblood microparticle
A0072732biological_processcellular response to calcium ion starvation
A0098869biological_processcellular oxidant detoxification
A0140272molecular_functionexogenous protein binding
A1903981molecular_functionenterobactin binding
B0003677molecular_functionDNA binding
B0005504molecular_functionfatty acid binding
B0005507molecular_functioncopper ion binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005783cellular_componentendoplasmic reticulum
B0005788cellular_componentendoplasmic reticulum lumen
B0005794cellular_componentGolgi apparatus
B0008289molecular_functionlipid binding
B0009267biological_processcellular response to starvation
B0015643molecular_functiontoxic substance binding
B0016209molecular_functionantioxidant activity
B0019825molecular_functionoxygen binding
B0030170molecular_functionpyridoxal phosphate binding
B0031093cellular_componentplatelet alpha granule lumen
B0032991cellular_componentprotein-containing complex
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0051087molecular_functionprotein-folding chaperone binding
B0051902biological_processnegative regulation of mitochondrial depolarization
B0070062cellular_componentextracellular exosome
B0072562cellular_componentblood microparticle
B0072732biological_processcellular response to calcium ion starvation
B0098869biological_processcellular oxidant detoxification
B0140272molecular_functionexogenous protein binding
B1903981molecular_functionenterobactin binding
C0003677molecular_functionDNA binding
C0005504molecular_functionfatty acid binding
C0005507molecular_functioncopper ion binding
C0005515molecular_functionprotein binding
C0005576cellular_componentextracellular region
C0005615cellular_componentextracellular space
C0005634cellular_componentnucleus
C0005737cellular_componentcytoplasm
C0005783cellular_componentendoplasmic reticulum
C0005788cellular_componentendoplasmic reticulum lumen
C0005794cellular_componentGolgi apparatus
C0008289molecular_functionlipid binding
C0009267biological_processcellular response to starvation
C0015643molecular_functiontoxic substance binding
C0016209molecular_functionantioxidant activity
C0019825molecular_functionoxygen binding
C0030170molecular_functionpyridoxal phosphate binding
C0031093cellular_componentplatelet alpha granule lumen
C0032991cellular_componentprotein-containing complex
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C0051087molecular_functionprotein-folding chaperone binding
C0051902biological_processnegative regulation of mitochondrial depolarization
C0070062cellular_componentextracellular exosome
C0072562cellular_componentblood microparticle
C0072732biological_processcellular response to calcium ion starvation
C0098869biological_processcellular oxidant detoxification
C0140272molecular_functionexogenous protein binding
C1903981molecular_functionenterobactin binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue EIC A 601
ChainResidue
ALYS195
ALYS199
APHE211
ATRP214
ATYR452
ASO4607

site_idAC2
Number of Residues5
Detailsbinding site for residue OCA A 602
ChainResidue
ALEU250
ALEU251
AVAL46
APHE70
AGLY248

site_idAC3
Number of Residues8
Detailsbinding site for residue PLM A 603
ChainResidue
ATYR138
AARG145
AHIS146
ATYR161
ALEU185
AARG186
AGLY189
ALYS190

site_idAC4
Number of Residues5
Detailsbinding site for residue OCA A 604
ChainResidue
AALA213
ALEU327
ALYS351
AGLU354
AHOH1042

site_idAC5
Number of Residues10
Detailsbinding site for residue TRP A 605
ChainResidue
ALEU387
AASN391
ALEU407
AARG410
ATYR411
ALEU430
AVAL433
AGLY434
ASER489
AHOH1100

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 606
ChainResidue
AARG186
ALYS190
AARG428
ALYS432

site_idAC7
Number of Residues8
Detailsbinding site for residue SO4 A 607
ChainResidue
ATYR150
ALYS199
ALEU238
AHIS242
AARG257
AALA291
AEIC601
AHOH1044

site_idAC8
Number of Residues5
Detailsbinding site for residue SO4 A 608
ChainResidue
AGLN417
ASER470
AASP471
AARG472
AASP494

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 A 609
ChainResidue
ASER419
ATHR420
ALYS500
ALYS534

site_idAD1
Number of Residues2
Detailsbinding site for residue SO4 A 610
ChainResidue
AGLU400
ATYR401

site_idAD2
Number of Residues6
Detailsbinding site for residue SO4 A 611
ChainResidue
ALYS351
ASER480
ALEU481
AVAL482
AHOH1072
AHOH1091

site_idAD3
Number of Residues5
Detailsbinding site for residue SO4 A 612
ChainResidue
AASP121
AALA172
AASP173
ALYS174
AALA175

site_idAD4
Number of Residues3
Detailsbinding site for residue SO4 A 613
ChainResidue
ATHR540
ALYS541
BLYS372

site_idAD5
Number of Residues2
Detailsbinding site for residue PEG A 614
ChainResidue
ATYR452
AHOH1085

site_idAD6
Number of Residues5
Detailsbinding site for residue PGE A 615
ChainResidue
AGLU277
AGLU280
ALYS281
CMET298
CHOH1086

site_idAD7
Number of Residues2
Detailsbinding site for residue PG4 A 616
ChainResidue
ATHR236
ATHR243

site_idAD8
Number of Residues3
Detailsbinding site for residue PEG A 617
ChainResidue
AARG348
ATHR352
AASN483

site_idAD9
Number of Residues3
Detailsbinding site for residue PG4 A 618
ChainResidue
ALYS205
ALYS323
AGLU465

site_idAE1
Number of Residues3
Detailsbinding site for residue PEG A 619
ChainResidue
ALYS225
AASP269
ASER270

site_idAE2
Number of Residues8
Detailsbinding site for residue EIC B 601
ChainResidue
BLYS195
BLYS199
BPHE211
BTRP214
BARG218
BTYR452
BSO4606
BHOH1040

site_idAE3
Number of Residues7
Detailsbinding site for residue OCA B 602
ChainResidue
BPHE70
BLYS73
BGLY248
BLEU250
BLEU251
BVAL46
BLEU69

site_idAE4
Number of Residues10
Detailsbinding site for residue PLM B 603
ChainResidue
BARG114
BTYR138
BILE142
BHIS146
BPHE149
BTYR161
BLEU185
BARG186
BGLY189
BLYS190

site_idAE5
Number of Residues8
Detailsbinding site for residue PLM B 604
ChainResidue
BALA213
BVAL216
BLEU327
BLYS351
BGLU354
BHOH1084
BHOH1175
CHOH1123

site_idAE6
Number of Residues8
Detailsbinding site for residue TRP B 605
ChainResidue
BLEU387
BASN391
BARG410
BTYR411
BLEU430
BVAL433
BGLY434
BSER489

site_idAE7
Number of Residues9
Detailsbinding site for residue SO4 B 606
ChainResidue
BTYR150
BLYS199
BLEU238
BHIS242
BARG257
BALA291
BEIC601
BHOH1125
BHOH1136

site_idAE8
Number of Residues4
Detailsbinding site for residue SO4 B 607
ChainResidue
BGLN417
BSER470
BASP471
BARG472

site_idAE9
Number of Residues4
Detailsbinding site for residue SO4 B 608
ChainResidue
BSER419
BTHR420
BLYS500
BLYS534

site_idAF1
Number of Residues2
Detailsbinding site for residue SO4 B 609
ChainResidue
BGLU400
BTYR401

site_idAF2
Number of Residues4
Detailsbinding site for residue SO4 B 610
ChainResidue
BARG186
BLYS190
BARG428
BLYS432

site_idAF3
Number of Residues6
Detailsbinding site for residue SO4 B 611
ChainResidue
BLYS351
BSER480
BLEU481
BVAL482
BPEG616
BHOH1071

site_idAF4
Number of Residues3
Detailsbinding site for residue SO4 B 612
ChainResidue
ALYS372
BTHR540
BLYS541

site_idAF5
Number of Residues3
Detailsbinding site for residue PEG B 613
ChainResidue
BPHE134
BLYS137
BTYR161

site_idAF6
Number of Residues2
Detailsbinding site for residue PEG B 614
ChainResidue
BTYR452
BVAL456

site_idAF7
Number of Residues6
Detailsbinding site for residue PGE B 615
ChainResidue
BLYS233
BASP237
BASP256
BASP259
BLEU260
BHOH1174

site_idAF8
Number of Residues4
Detailsbinding site for residue PEG B 616
ChainResidue
BARG348
BTHR352
BASN483
BSO4611

site_idAF9
Number of Residues4
Detailsbinding site for residue PEG B 617
ChainResidue
BSER58
BASP63
BPRO299
BHOH1053

site_idAG1
Number of Residues5
Detailsbinding site for residue PG4 B 618
ChainResidue
AGLU297
BLYS225
BASP269
BSER272
BHOH1172

site_idAG2
Number of Residues2
Detailsbinding site for residue PEG B 619
ChainResidue
BGLU354
BHOH1170

site_idAG3
Number of Residues1
Detailsbinding site for residue PEG B 620
ChainResidue
BTHR356

site_idAG4
Number of Residues6
Detailsbinding site for residue 1PE B 622
ChainResidue
BLYS323
BGLU358
BHOH1170
CLYS205
CPHE206
CTHR478

site_idAG5
Number of Residues2
Detailsbinding site for residue PGE B 623
ChainResidue
BTHR243
BASP249

site_idAG6
Number of Residues8
Detailsbinding site for residue EIC C 601
ChainResidue
CLYS195
CLYS199
CPHE211
CTRP214
CARG218
CASP451
CVAL455
CSO4607

site_idAG7
Number of Residues6
Detailsbinding site for residue OCA C 602
ChainResidue
CPHE70
CLYS73
CGLY248
CLEU250
CLEU251
CPEG613

site_idAG8
Number of Residues7
Detailsbinding site for residue PLM C 603
ChainResidue
CTYR138
CHIS146
CPHE157
CTYR161
CLEU185
CGLY189
CLYS190

site_idAG9
Number of Residues3
Detailsbinding site for residue OCA C 604
ChainResidue
CLYS351
CGLU354
CHOH1101

site_idAH1
Number of Residues8
Detailsbinding site for residue TRP C 605
ChainResidue
CASN391
CPHE403
CLEU407
CARG410
CTYR411
CLEU430
CGLY434
CSER489

site_idAH2
Number of Residues5
Detailsbinding site for residue SO4 C 606
ChainResidue
CLYS351
CSER480
CLEU481
CVAL482
CPEG610

site_idAH3
Number of Residues9
Detailsbinding site for residue SO4 C 607
ChainResidue
CTYR150
CLYS199
CLEU238
CHIS242
CARG257
CALA291
CEIC601
CHOH1036
CHOH1094

site_idAH4
Number of Residues5
Detailsbinding site for residue SO4 C 608
ChainResidue
CGLN417
CSER470
CASP471
CARG472
CTHR496

site_idAH5
Number of Residues4
Detailsbinding site for residue SO4 C 609
ChainResidue
CSER304
CLEU305
CALA306
CARG337

site_idAH6
Number of Residues4
Detailsbinding site for residue PEG C 610
ChainResidue
CARG348
CSER480
CASN483
CSO4606

site_idAH7
Number of Residues3
Detailsbinding site for residue PGE C 611
ChainResidue
CLYS225
CASP269
CHOH1141

site_idAH8
Number of Residues4
Detailsbinding site for residue PG4 C 612
ChainResidue
BLYS205
BGLU465
CALA320
CLYS323

site_idAH9
Number of Residues2
Detailsbinding site for residue PEG C 613
ChainResidue
CLYS73
COCA602

site_idAI1
Number of Residues3
Detailsbinding site for residue PG4 C 614
ChainResidue
BHOH1175
CGLU244
CASP249

site_idAI2
Number of Residues4
Detailsbinding site for residue PEG C 615
ChainResidue
CLYS190
CSER193
CALA194
CGLN459

Functional Information from PROSITE/UniProt
site_idPS00212
Number of Residues25
DetailsALBUMIN_1 Albumin domain signature. YkaafteCCqaAdkaaCLlpkldeL
ChainResidueDetails
ATYR161-LEU185
ATYR353-PHE377
APHE551-LEU575

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P02770
ChainResidueDetails
AHIS3
BHIS3
CHIS3

site_idSWS_FT_FI2
Number of Residues18
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P02769
ChainResidueDetails
AGLU6
BGLU252
BASP255
BASP259
CGLU6
CASP13
CGLU244
CGLU252
CASP255
CASP259
AASP13
AGLU244
AGLU252
AASP255
AASP259
BGLU6
BASP13
BGLU244

site_idSWS_FT_FI3
Number of Residues9
DetailsBINDING: BINDING => ECO:0000269|PubMed:28567254, ECO:0007744|PDB:5IJF
ChainResidueDetails
AHIS67
AHIS247
AASP249
BHIS67
BHIS247
BASP249
CHIS67
CHIS247
CASP249

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:656055
ChainResidueDetails
ALYS240
BLYS240
CLYS240

site_idSWS_FT_FI5
Number of Residues111
DetailsSITE: Not glycated => ECO:0000269|PubMed:15047055
ChainResidueDetails
ALYS4
ALYS174
CLYS436
CLYS466
CLYS475
CLYS500
CLYS519
CLYS524
CLYS538
CLYS541
CLYS557
CLYS560
ALYS181
CLYS564
CLYS574
ALYS190
ALYS195
ALYS205
ALYS212
ALYS240
ALYS262
ALYS274
ALYS286
ALYS20
ALYS359
ALYS372
ALYS389
ALYS402
ALYS414
ALYS432
ALYS436
ALYS466
ALYS475
ALYS500
ALYS41
ALYS519
ALYS524
ALYS538
ALYS541
ALYS557
ALYS560
ALYS564
ALYS574
BLYS4
BLYS20
ALYS64
BLYS41
BLYS64
BLYS73
BLYS93
BLYS106
BLYS136
BLYS159
BLYS174
BLYS181
BLYS190
ALYS73
BLYS195
BLYS205
BLYS212
BLYS240
BLYS262
BLYS274
BLYS286
BLYS359
BLYS372
BLYS389
ALYS93
BLYS402
BLYS414
BLYS432
BLYS436
BLYS466
BLYS475
BLYS500
BLYS519
BLYS524
BLYS538
ALYS106
BLYS541
BLYS557
BLYS560
BLYS564
BLYS574
CLYS4
CLYS20
CLYS41
CLYS64
CLYS73
ALYS136
CLYS93
CLYS106
CLYS136
CLYS159
CLYS174
CLYS181
CLYS190
CLYS195
CLYS205
CLYS212
ALYS159
CLYS240
CLYS262
CLYS274
CLYS286
CLYS359
CLYS372
CLYS389
CLYS402
CLYS414
CLYS432

site_idSWS_FT_FI6
Number of Residues3
DetailsSITE: Aspirin-acetylated lysine
ChainResidueDetails
ALYS199
BLYS199
CLYS199

site_idSWS_FT_FI7
Number of Residues3
DetailsMOD_RES: Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039
ChainResidueDetails
ASER5
BSER5
CSER5

site_idSWS_FT_FI8
Number of Residues3
DetailsMOD_RES: Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039, ECO:0007744|PubMed:18318008, ECO:0007744|PubMed:24275569
ChainResidueDetails
ASER58
BSER58
CSER58

site_idSWS_FT_FI9
Number of Residues3
DetailsMOD_RES: Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039, ECO:0007744|PubMed:24275569
ChainResidueDetails
ASER65
BSER65
CSER65

site_idSWS_FT_FI10
Number of Residues3
DetailsMOD_RES: Phosphothreonine; by FAM20C => ECO:0000269|PubMed:26091039
ChainResidueDetails
ATHR83
BTHR83
CTHR83

site_idSWS_FT_FI11
Number of Residues12
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P07724
ChainResidueDetails
ALYS205
CLYS436
CLYS519
CLYS564
ALYS436
ALYS519
ALYS564
BLYS205
BLYS436
BLYS519
BLYS564
CLYS205

site_idSWS_FT_FI12
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P07724
ChainResidueDetails
ASER273
BSER273
CSER273

site_idSWS_FT_FI13
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19690332
ChainResidueDetails
ASER419
BSER419
CSER419

site_idSWS_FT_FI14
Number of Residues6
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:19690332
ChainResidueDetails
ATHR420
ATHR422
BTHR420
BTHR422
CTHR420
CTHR422

site_idSWS_FT_FI15
Number of Residues3
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569
ChainResidueDetails
ASER489
BSER489
CSER489

site_idSWS_FT_FI16
Number of Residues3
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0007744|PubMed:24129315
ChainResidueDetails
ALYS534
BLYS534
CLYS534

site_idSWS_FT_FI17
Number of Residues12
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine => ECO:0000269|PubMed:3759977
ChainResidueDetails
ALYS12
CLYS281
CLYS317
CLYS439
ALYS281
ALYS317
ALYS439
BLYS12
BLYS281
BLYS317
BLYS439
CLYS12

site_idSWS_FT_FI18
Number of Residues39
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:15047055
ChainResidueDetails
ALYS51
ALYS444
ALYS536
ALYS545
ALYS573
BLYS51
BLYS137
BLYS162
BLYS225
BLYS276
BLYS313
ALYS137
BLYS323
BLYS378
BLYS413
BLYS444
BLYS536
BLYS545
BLYS573
CLYS51
CLYS137
CLYS162
ALYS162
CLYS225
CLYS276
CLYS313
CLYS323
CLYS378
CLYS413
CLYS444
CLYS536
CLYS545
CLYS573
ALYS225
ALYS276
ALYS313
ALYS323
ALYS378
ALYS413

site_idSWS_FT_FI19
Number of Residues3
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:3759977, ECO:0000269|PubMed:6853480
ChainResidueDetails
ALYS199
BLYS199
CLYS199

site_idSWS_FT_FI20
Number of Residues6
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine => ECO:0000269|PubMed:15047055, ECO:0000269|PubMed:3759977
ChainResidueDetails
ALYS233
ALYS351
BLYS233
BLYS351
CLYS233
CLYS351

site_idSWS_FT_FI21
Number of Residues3
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine; in variant Redhill
ChainResidueDetails
AASN318
BASN318
CASN318

site_idSWS_FT_FI22
Number of Residues3
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine; in variant Casebrook
ChainResidueDetails
AASP494
BASP494
CASP494

site_idSWS_FT_FI23
Number of Residues3
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine => ECO:0000269|PubMed:15047055, ECO:0000269|PubMed:3759977, ECO:0000269|PubMed:6706980, ECO:0000269|PubMed:6853480
ChainResidueDetails
ALYS525
BLYS525
CLYS525

site_idSWS_FT_FI24
Number of Residues3
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; alternate => ECO:0000269|PubMed:3759977
ChainResidueDetails
ALYS534
BLYS534
CLYS534

224004

PDB entries from 2024-08-21

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