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5YVZ

Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and Fe(III)

Functional Information from GO Data
ChainGOidnamespacecontents
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue FE A 401
ChainResidue
AHIS146
AASP148
AHIS260
AAKG402
AHOH582

site_idAC2
Number of Residues12
Detailsbinding site for residue AKG A 402
ChainResidue
AARG162
APHE164
AARG174
ATRP176
AHIS260
AVAL262
AFE401
AHOH514
AARG127
AASP142
AHIS146
AASP148

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL A 403
ChainResidue
AGLY40
AGLY179
AGLU180
AVAL258
ALEU259
AHOH548

site_idAC4
Number of Residues9
Detailsbinding site for residue PG4 A 404
ChainResidue
AILE178
AGLY179
ALEU193
ATYR220
AGLN240
AVAL241
ALEU295
AHOH552
AHOH612

site_idAC5
Number of Residues2
Detailsbinding site for residue PG4 A 405
ChainResidue
AGLY212
ATYR213

site_idAC6
Number of Residues4
Detailsbinding site for residue PG4 A 406
ChainResidue
ALEU57
APHE202
ATYR205
AHOH517

site_idAC7
Number of Residues8
Detailsbinding site for residue PG4 A 407
ChainResidue
AARG76
AALA122
AARG123
ASER153
APRO154
AILE160
AARG162
AHIS274

site_idAC8
Number of Residues2
Detailsbinding site for residue ACT A 408
ChainResidue
AARG214
ALEU222

site_idAC9
Number of Residues6
Detailsbinding site for residue SO4 A 410
ChainResidue
ATHR79
ALYS81
ALYS276
AASN278
ASER304
AHOH599

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PDB entries from 2024-10-16

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