5YTT

Crystal structure of YB1 cold-shock domain in complex with UCAUGU

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003676	molecular_function	nucleic acid binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue SO4 A 201

Chain	Residue
A	LYS52
A	LYS53
A	VAL54
A	ARG101
A	SO4202

---

site_id	AC2
Number of Residues	4
Details	binding site for residue SO4 A 202

Chain	Residue
A	LYS92
A	LYS93
A	ARG101
A	SO4201

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Functional Information from PROSITE/UniProt

site_id	PS00352
Number of Residues	20
Details	CSD_1 Cold-shock (CSD) domain signature. YGFInrndtkeDVFvHqTaI

Chain	Residue	Details
A	TYR72-ILE91

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	5
Details	Region: {"description":"C5-methylcytosine binding","evidences":[{"source":"PubMed","id":"31358969","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6A6L","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	Site: {"description":"Important for C5-methylcytosine-recognition","evidences":[{"source":"PubMed","id":"31358969","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI3
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine; by PKB/AKT1","evidences":[{"source":"PubMed","id":"15806160","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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