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5YTT

Crystal structure of YB1 cold-shock domain in complex with UCAUGU

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 201
ChainResidue
ALYS52
ALYS53
AVAL54
AARG101
ASO4202

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 202
ChainResidue
ALYS92
ALYS93
AARG101
ASO4201

Functional Information from PROSITE/UniProt
site_idPS00352
Number of Residues20
DetailsCSD_1 Cold-shock (CSD) domain signature. YGFInrndtkeDVFvHqTaI
ChainResidueDetails
ATYR72-ILE91

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Important for C5-methylcytosine-recognition => ECO:0000269|PubMed:31358969
ChainResidueDetails
ATRP65

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKB/AKT1 => ECO:0000269|PubMed:15806160, ECO:0007744|PubMed:19690332
ChainResidueDetails
ASER102

229183

PDB entries from 2024-12-18

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