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5YTE

Large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with with natural dT:dATP base pair

Functional Information from GO Data
ChainGOidnamespacecontents
A0001882molecular_functionnucleoside binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue DTP A 901
ChainResidue
AARG573
ALYS663
APHE667
AASP785
AMG902
AMG903
AHOH1103
AHOH1106
AHOH1131
BDOC112
CDT204
AASP610
CDG205
ATYR611
ASER612
AGLN613
AILE614
AGLU615
AHIS639
AARG659

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 902
ChainResidue
AASP610
AASP785
ADTP901
AMG903
AHOH1065
BDOC112

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 903
ChainResidue
AASP610
ATYR611
AASP785
ADTP901
AMG902

site_idAC4
Number of Residues9
Detailsbinding site for residue GOL A 904
ChainResidue
ATHR544
APRO548
APRO579
AASN580
AASN583
AHOH1006
AHOH1080
CDC209
CDC210

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL B 201
ChainResidue
BDG107
BDG108
BHOH305
CDG208
CDC209
CHOH315

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
ChainResidueDetails
AARG659-LEU678

224201

PDB entries from 2024-08-28

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