5YQ7
Cryo-EM structure of the RC-LH core complex from Roseiflexus castenholzii
Functional Information from GO Data
Chain | GOid | namespace | contents |
0 | 0005886 | cellular_component | plasma membrane |
0 | 0016020 | cellular_component | membrane |
0 | 0019684 | biological_process | photosynthesis, light reaction |
0 | 0030076 | cellular_component | light-harvesting complex |
0 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
0 | 0042314 | molecular_function | bacteriochlorophyll binding |
0 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
0 | 0046872 | molecular_function | metal ion binding |
1 | 0005886 | cellular_component | plasma membrane |
1 | 0016020 | cellular_component | membrane |
1 | 0019684 | biological_process | photosynthesis, light reaction |
1 | 0019866 | cellular_component | organelle inner membrane |
1 | 0030076 | cellular_component | light-harvesting complex |
1 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
1 | 0042314 | molecular_function | bacteriochlorophyll binding |
1 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
1 | 0046872 | molecular_function | metal ion binding |
2 | 0005886 | cellular_component | plasma membrane |
2 | 0016020 | cellular_component | membrane |
2 | 0019684 | biological_process | photosynthesis, light reaction |
2 | 0030076 | cellular_component | light-harvesting complex |
2 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
2 | 0042314 | molecular_function | bacteriochlorophyll binding |
2 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
2 | 0046872 | molecular_function | metal ion binding |
3 | 0005886 | cellular_component | plasma membrane |
3 | 0016020 | cellular_component | membrane |
3 | 0019684 | biological_process | photosynthesis, light reaction |
3 | 0019866 | cellular_component | organelle inner membrane |
3 | 0030076 | cellular_component | light-harvesting complex |
3 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
3 | 0042314 | molecular_function | bacteriochlorophyll binding |
3 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
3 | 0046872 | molecular_function | metal ion binding |
4 | 0005886 | cellular_component | plasma membrane |
4 | 0016020 | cellular_component | membrane |
4 | 0019684 | biological_process | photosynthesis, light reaction |
4 | 0030076 | cellular_component | light-harvesting complex |
4 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
4 | 0042314 | molecular_function | bacteriochlorophyll binding |
4 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
4 | 0046872 | molecular_function | metal ion binding |
5 | 0005886 | cellular_component | plasma membrane |
5 | 0016020 | cellular_component | membrane |
5 | 0019684 | biological_process | photosynthesis, light reaction |
5 | 0019866 | cellular_component | organelle inner membrane |
5 | 0030076 | cellular_component | light-harvesting complex |
5 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
5 | 0042314 | molecular_function | bacteriochlorophyll binding |
5 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
5 | 0046872 | molecular_function | metal ion binding |
6 | 0005886 | cellular_component | plasma membrane |
6 | 0016020 | cellular_component | membrane |
6 | 0019684 | biological_process | photosynthesis, light reaction |
6 | 0030076 | cellular_component | light-harvesting complex |
6 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
6 | 0042314 | molecular_function | bacteriochlorophyll binding |
6 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
6 | 0046872 | molecular_function | metal ion binding |
7 | 0005886 | cellular_component | plasma membrane |
7 | 0016020 | cellular_component | membrane |
7 | 0019684 | biological_process | photosynthesis, light reaction |
7 | 0019866 | cellular_component | organelle inner membrane |
7 | 0030076 | cellular_component | light-harvesting complex |
7 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
7 | 0042314 | molecular_function | bacteriochlorophyll binding |
7 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
7 | 0046872 | molecular_function | metal ion binding |
8 | 0005886 | cellular_component | plasma membrane |
8 | 0016020 | cellular_component | membrane |
8 | 0019684 | biological_process | photosynthesis, light reaction |
8 | 0030076 | cellular_component | light-harvesting complex |
8 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
8 | 0042314 | molecular_function | bacteriochlorophyll binding |
8 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
8 | 0046872 | molecular_function | metal ion binding |
9 | 0005886 | cellular_component | plasma membrane |
9 | 0016020 | cellular_component | membrane |
9 | 0019684 | biological_process | photosynthesis, light reaction |
9 | 0019866 | cellular_component | organelle inner membrane |
9 | 0030076 | cellular_component | light-harvesting complex |
9 | 0030077 | cellular_component | plasma membrane light-harvesting complex |
9 | 0042314 | molecular_function | bacteriochlorophyll binding |
9 | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
9 | 0046872 | molecular_function | metal ion binding |
A | 0005886 | cellular_component | plasma membrane |
A | 0016020 | cellular_component | membrane |
A | 0019684 | biological_process | photosynthesis, light reaction |
A | 0019866 | cellular_component | organelle inner membrane |
A | 0030076 | cellular_component | light-harvesting complex |
A | 0030077 | cellular_component | plasma membrane light-harvesting complex |
A | 0042314 | molecular_function | bacteriochlorophyll binding |
A | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0005886 | cellular_component | plasma membrane |
B | 0016020 | cellular_component | membrane |
B | 0019684 | biological_process | photosynthesis, light reaction |
B | 0030076 | cellular_component | light-harvesting complex |
B | 0030077 | cellular_component | plasma membrane light-harvesting complex |
B | 0042314 | molecular_function | bacteriochlorophyll binding |
B | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0005506 | molecular_function | iron ion binding |
C | 0009055 | molecular_function | electron transfer activity |
C | 0015979 | biological_process | photosynthesis |
C | 0016020 | cellular_component | membrane |
C | 0019684 | biological_process | photosynthesis, light reaction |
C | 0020037 | molecular_function | heme binding |
C | 0030077 | cellular_component | plasma membrane light-harvesting complex |
D | 0005886 | cellular_component | plasma membrane |
D | 0016020 | cellular_component | membrane |
D | 0019684 | biological_process | photosynthesis, light reaction |
D | 0019866 | cellular_component | organelle inner membrane |
D | 0030076 | cellular_component | light-harvesting complex |
D | 0030077 | cellular_component | plasma membrane light-harvesting complex |
D | 0042314 | molecular_function | bacteriochlorophyll binding |
D | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
D | 0046872 | molecular_function | metal ion binding |
E | 0005886 | cellular_component | plasma membrane |
E | 0016020 | cellular_component | membrane |
E | 0019684 | biological_process | photosynthesis, light reaction |
E | 0030076 | cellular_component | light-harvesting complex |
E | 0030077 | cellular_component | plasma membrane light-harvesting complex |
E | 0042314 | molecular_function | bacteriochlorophyll binding |
E | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
E | 0046872 | molecular_function | metal ion binding |
F | 0005886 | cellular_component | plasma membrane |
F | 0016020 | cellular_component | membrane |
F | 0019684 | biological_process | photosynthesis, light reaction |
F | 0019866 | cellular_component | organelle inner membrane |
F | 0030076 | cellular_component | light-harvesting complex |
F | 0030077 | cellular_component | plasma membrane light-harvesting complex |
F | 0042314 | molecular_function | bacteriochlorophyll binding |
F | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
F | 0046872 | molecular_function | metal ion binding |
G | 0005886 | cellular_component | plasma membrane |
G | 0016020 | cellular_component | membrane |
G | 0019684 | biological_process | photosynthesis, light reaction |
G | 0030076 | cellular_component | light-harvesting complex |
G | 0030077 | cellular_component | plasma membrane light-harvesting complex |
G | 0042314 | molecular_function | bacteriochlorophyll binding |
G | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
G | 0046872 | molecular_function | metal ion binding |
H | 0005886 | cellular_component | plasma membrane |
H | 0016020 | cellular_component | membrane |
H | 0019684 | biological_process | photosynthesis, light reaction |
H | 0019866 | cellular_component | organelle inner membrane |
H | 0030076 | cellular_component | light-harvesting complex |
H | 0030077 | cellular_component | plasma membrane light-harvesting complex |
H | 0042314 | molecular_function | bacteriochlorophyll binding |
H | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
H | 0046872 | molecular_function | metal ion binding |
I | 0005886 | cellular_component | plasma membrane |
I | 0016020 | cellular_component | membrane |
I | 0019684 | biological_process | photosynthesis, light reaction |
I | 0030076 | cellular_component | light-harvesting complex |
I | 0030077 | cellular_component | plasma membrane light-harvesting complex |
I | 0042314 | molecular_function | bacteriochlorophyll binding |
I | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
I | 0046872 | molecular_function | metal ion binding |
J | 0005886 | cellular_component | plasma membrane |
J | 0016020 | cellular_component | membrane |
J | 0019684 | biological_process | photosynthesis, light reaction |
J | 0019866 | cellular_component | organelle inner membrane |
J | 0030076 | cellular_component | light-harvesting complex |
J | 0030077 | cellular_component | plasma membrane light-harvesting complex |
J | 0042314 | molecular_function | bacteriochlorophyll binding |
J | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
J | 0046872 | molecular_function | metal ion binding |
K | 0005886 | cellular_component | plasma membrane |
K | 0016020 | cellular_component | membrane |
K | 0019684 | biological_process | photosynthesis, light reaction |
K | 0030076 | cellular_component | light-harvesting complex |
K | 0030077 | cellular_component | plasma membrane light-harvesting complex |
K | 0042314 | molecular_function | bacteriochlorophyll binding |
K | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
K | 0046872 | molecular_function | metal ion binding |
L | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
L | 0019684 | biological_process | photosynthesis, light reaction |
L | 0030077 | cellular_component | plasma membrane light-harvesting complex |
L | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
M | 0009772 | biological_process | photosynthetic electron transport in photosystem II |
M | 0019684 | biological_process | photosynthesis, light reaction |
M | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
N | 0005886 | cellular_component | plasma membrane |
N | 0016020 | cellular_component | membrane |
N | 0019684 | biological_process | photosynthesis, light reaction |
N | 0019866 | cellular_component | organelle inner membrane |
N | 0030076 | cellular_component | light-harvesting complex |
N | 0030077 | cellular_component | plasma membrane light-harvesting complex |
N | 0042314 | molecular_function | bacteriochlorophyll binding |
N | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
N | 0046872 | molecular_function | metal ion binding |
O | 0005886 | cellular_component | plasma membrane |
O | 0016020 | cellular_component | membrane |
O | 0019684 | biological_process | photosynthesis, light reaction |
O | 0030076 | cellular_component | light-harvesting complex |
O | 0030077 | cellular_component | plasma membrane light-harvesting complex |
O | 0042314 | molecular_function | bacteriochlorophyll binding |
O | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
O | 0046872 | molecular_function | metal ion binding |
P | 0005886 | cellular_component | plasma membrane |
P | 0016020 | cellular_component | membrane |
P | 0019684 | biological_process | photosynthesis, light reaction |
P | 0019866 | cellular_component | organelle inner membrane |
P | 0030076 | cellular_component | light-harvesting complex |
P | 0030077 | cellular_component | plasma membrane light-harvesting complex |
P | 0042314 | molecular_function | bacteriochlorophyll binding |
P | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
P | 0046872 | molecular_function | metal ion binding |
Q | 0005886 | cellular_component | plasma membrane |
Q | 0016020 | cellular_component | membrane |
Q | 0019684 | biological_process | photosynthesis, light reaction |
Q | 0030076 | cellular_component | light-harvesting complex |
Q | 0030077 | cellular_component | plasma membrane light-harvesting complex |
Q | 0042314 | molecular_function | bacteriochlorophyll binding |
Q | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
Q | 0046872 | molecular_function | metal ion binding |
R | 0005886 | cellular_component | plasma membrane |
R | 0016020 | cellular_component | membrane |
R | 0019684 | biological_process | photosynthesis, light reaction |
R | 0019866 | cellular_component | organelle inner membrane |
R | 0030076 | cellular_component | light-harvesting complex |
R | 0030077 | cellular_component | plasma membrane light-harvesting complex |
R | 0042314 | molecular_function | bacteriochlorophyll binding |
R | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
R | 0046872 | molecular_function | metal ion binding |
S | 0005886 | cellular_component | plasma membrane |
S | 0016020 | cellular_component | membrane |
S | 0019684 | biological_process | photosynthesis, light reaction |
S | 0030076 | cellular_component | light-harvesting complex |
S | 0030077 | cellular_component | plasma membrane light-harvesting complex |
S | 0042314 | molecular_function | bacteriochlorophyll binding |
S | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
S | 0046872 | molecular_function | metal ion binding |
T | 0005886 | cellular_component | plasma membrane |
T | 0016020 | cellular_component | membrane |
T | 0019684 | biological_process | photosynthesis, light reaction |
T | 0019866 | cellular_component | organelle inner membrane |
T | 0030076 | cellular_component | light-harvesting complex |
T | 0030077 | cellular_component | plasma membrane light-harvesting complex |
T | 0042314 | molecular_function | bacteriochlorophyll binding |
T | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
T | 0046872 | molecular_function | metal ion binding |
U | 0005886 | cellular_component | plasma membrane |
U | 0016020 | cellular_component | membrane |
U | 0019684 | biological_process | photosynthesis, light reaction |
U | 0030076 | cellular_component | light-harvesting complex |
U | 0030077 | cellular_component | plasma membrane light-harvesting complex |
U | 0042314 | molecular_function | bacteriochlorophyll binding |
U | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
U | 0046872 | molecular_function | metal ion binding |
V | 0005886 | cellular_component | plasma membrane |
V | 0016020 | cellular_component | membrane |
V | 0019684 | biological_process | photosynthesis, light reaction |
V | 0019866 | cellular_component | organelle inner membrane |
V | 0030076 | cellular_component | light-harvesting complex |
V | 0030077 | cellular_component | plasma membrane light-harvesting complex |
V | 0042314 | molecular_function | bacteriochlorophyll binding |
V | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
V | 0046872 | molecular_function | metal ion binding |
W | 0005886 | cellular_component | plasma membrane |
W | 0016020 | cellular_component | membrane |
W | 0019684 | biological_process | photosynthesis, light reaction |
W | 0030076 | cellular_component | light-harvesting complex |
W | 0030077 | cellular_component | plasma membrane light-harvesting complex |
W | 0042314 | molecular_function | bacteriochlorophyll binding |
W | 0045156 | molecular_function | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
W | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 13 |
Details | binding site for residue BCL E 101 |
Chain | Residue |
A | KGD101 |
E | HIS44 |
E | TRP53 |
F | KGD101 |
G | BCL102 |
A | BCL102 |
B | BCL101 |
D | ILE26 |
D | HIS27 |
D | PHE36 |
D | BCL101 |
E | GLY36 |
E | LEU37 |
site_id | AC2 |
Number of Residues | 9 |
Details | binding site for residue BCL E 102 |
Chain | Residue |
9 | KGD101 |
B | BCL101 |
D | SER11 |
E | TRP14 |
E | HIS26 |
E | VAL29 |
E | VAL30 |
E | ILE33 |
E | TYR34 |
site_id | AC3 |
Number of Residues | 13 |
Details | binding site for residue BCL B 101 |
Chain | Residue |
9 | BCL103 |
A | ALA23 |
A | HIS27 |
A | PHE36 |
A | KGD101 |
A | BCL102 |
B | GLY36 |
B | LEU37 |
B | HIS44 |
B | CYS47 |
B | TRP53 |
E | BCL101 |
E | BCL102 |
site_id | AC4 |
Number of Residues | 12 |
Details | binding site for residue BCL B 102 |
Chain | Residue |
0 | LEU24 |
0 | ILE39 |
0 | BCL101 |
9 | KGD102 |
9 | BCL103 |
A | PHE8 |
B | TRP14 |
B | HIS26 |
B | VAL29 |
B | VAL30 |
B | ILE33 |
B | TYR34 |
site_id | AC5 |
Number of Residues | 14 |
Details | binding site for residue BCL 0 101 |
Chain | Residue |
0 | ILE33 |
0 | GLY36 |
0 | LEU37 |
0 | ALA40 |
0 | HIS44 |
0 | CYS47 |
0 | TRP53 |
7 | BCL101 |
9 | ALA23 |
9 | ILE26 |
9 | HIS27 |
9 | KGD101 |
9 | BCL103 |
B | BCL102 |
site_id | AC6 |
Number of Residues | 9 |
Details | binding site for residue BCL 0 102 |
Chain | Residue |
0 | TRP14 |
0 | HIS26 |
0 | VAL29 |
0 | VAL30 |
0 | ILE33 |
5 | KGD101 |
8 | BCL101 |
9 | PHE8 |
9 | SER11 |
site_id | AC7 |
Number of Residues | 12 |
Details | binding site for residue BCL L 1001 |
Chain | Residue |
L | TRP167 |
L | PHE185 |
L | HIS192 |
L | LEU193 |
L | BCL1002 |
L | BPH1003 |
M | MET526 |
M | ILE529 |
M | PHE530 |
M | LEU533 |
M | GLY534 |
M | BCL702 |
site_id | AC8 |
Number of Residues | 14 |
Details | binding site for residue BCL L 1002 |
Chain | Residue |
L | PHE136 |
L | VAL163 |
L | PHE206 |
L | PHE207 |
L | HIS212 |
L | ILE216 |
L | VAL275 |
L | SER278 |
L | ASN279 |
L | ILE282 |
L | BCL1001 |
L | BPH1003 |
M | BCL702 |
M | BPH703 |
site_id | AC9 |
Number of Residues | 16 |
Details | binding site for residue BPH L 1003 |
Chain | Residue |
L | GLN143 |
L | ALA159 |
L | PHE160 |
L | LEU187 |
L | ILE189 |
L | GLY271 |
L | BCL1001 |
L | BCL1002 |
M | LEU533 |
M | THR536 |
M | LEU537 |
M | MET541 |
M | TRP575 |
L | ILE80 |
L | VAL84 |
L | TRP139 |
site_id | AD1 |
Number of Residues | 10 |
Details | binding site for residue MQE L 1004 |
Chain | Residue |
L | PHE225 |
L | HIS247 |
L | TRP250 |
L | SER257 |
L | ILE258 |
L | GLY259 |
L | GLU260 |
L | ILE261 |
L | VAL266 |
L | TRP269 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue FE L 1005 |
Chain | Residue |
L | HIS229 |
L | HIS264 |
M | HIS542 |
M | GLU557 |
M | HIS589 |
site_id | AD3 |
Number of Residues | 13 |
Details | binding site for residue BCL 8 101 |
Chain | Residue |
0 | BCL102 |
5 | BCL102 |
6 | BCL101 |
7 | ALA23 |
7 | ILE26 |
7 | HIS27 |
7 | BCL101 |
8 | GLY36 |
8 | LEU37 |
8 | HIS44 |
8 | TRP53 |
8 | BCL102 |
9 | KGD102 |
site_id | AD4 |
Number of Residues | 11 |
Details | binding site for residue BCL 8 102 |
Chain | Residue |
3 | KGD101 |
5 | BCL102 |
6 | ILE39 |
6 | ALA43 |
7 | PHE8 |
8 | TRP14 |
8 | HIS26 |
8 | VAL29 |
8 | VAL30 |
8 | ILE33 |
8 | BCL101 |
site_id | AD5 |
Number of Residues | 11 |
Details | binding site for residue BCL 6 101 |
Chain | Residue |
3 | KGD101 |
3 | BCL102 |
5 | ALA23 |
5 | HIS27 |
5 | KGD101 |
5 | BCL102 |
6 | LEU37 |
6 | HIS44 |
6 | TRP53 |
6 | BCL102 |
8 | BCL101 |
site_id | AD6 |
Number of Residues | 10 |
Details | binding site for residue BCL 6 102 |
Chain | Residue |
3 | KGD103 |
4 | ILE39 |
4 | BCL101 |
5 | PHE8 |
6 | TRP14 |
6 | HIS26 |
6 | VAL29 |
6 | VAL30 |
6 | ILE33 |
6 | BCL101 |
site_id | AD7 |
Number of Residues | 8 |
Details | binding site for residue BCL 4 102 |
Chain | Residue |
1 | BCL101 |
2 | BCL101 |
4 | TRP14 |
4 | HIS26 |
4 | VAL29 |
4 | VAL30 |
4 | ILE33 |
4 | TYR34 |
site_id | AD8 |
Number of Residues | 9 |
Details | binding site for residue BCL 2 101 |
Chain | Residue |
1 | ALA23 |
1 | ILE26 |
1 | HIS27 |
1 | BCL101 |
2 | GLY36 |
2 | HIS44 |
2 | TRP53 |
3 | KGD103 |
4 | BCL102 |
site_id | AD9 |
Number of Residues | 7 |
Details | binding site for residue BCL 2 102 |
Chain | Residue |
1 | SER11 |
2 | TRP14 |
2 | HIS26 |
2 | VAL29 |
2 | VAL30 |
2 | ILE33 |
2 | TYR34 |
site_id | AE1 |
Number of Residues | 12 |
Details | binding site for residue BCL K 101 |
Chain | Residue |
H | BCL101 |
J | ILE26 |
J | HIS27 |
J | PHE36 |
J | BCL102 |
K | LEU37 |
K | HIS44 |
K | CYS47 |
K | TRP53 |
N | KGD102 |
O | BCL101 |
O | BCL102 |
site_id | AE2 |
Number of Residues | 8 |
Details | binding site for residue BCL K 102 |
Chain | Residue |
H | KGD102 |
I | BCL101 |
J | PHE8 |
K | TRP14 |
K | HIS26 |
K | VAL29 |
K | VAL30 |
K | ILE33 |
site_id | AE3 |
Number of Residues | 11 |
Details | binding site for residue HEM C 501 |
Chain | Residue |
C | VAL91 |
C | VAL93 |
C | LEU94 |
C | MET106 |
C | VAL107 |
C | VAL110 |
C | CYS118 |
C | CYS121 |
C | HIS122 |
C | ALA128 |
C | ARG143 |
site_id | AE4 |
Number of Residues | 14 |
Details | binding site for residue HEM C 503 |
Chain | Residue |
C | TYR205 |
C | GLY207 |
C | GLY208 |
C | LEU209 |
C | VAL210 |
C | VAL211 |
C | THR212 |
C | MET229 |
C | CYS240 |
C | HIS244 |
C | PRO250 |
C | ILE261 |
L | TYR204 |
M | ILE514 |
site_id | AE5 |
Number of Residues | 13 |
Details | binding site for residue HEM C 504 |
Chain | Residue |
C | GLY165 |
C | GLY166 |
C | TYR167 |
C | ILE169 |
C | CYS174 |
C | MET232 |
C | GLN256 |
C | HIS259 |
C | MET263 |
C | CYS293 |
C | HIS297 |
C | ASN301 |
C | ILE302 |
site_id | AE6 |
Number of Residues | 10 |
Details | binding site for residue BCL I 101 |
Chain | Residue |
F | BCL102 |
G | BCL101 |
H | HIS27 |
H | BCL101 |
H | KGD102 |
I | GLY36 |
I | HIS44 |
I | TRP53 |
J | KGD101 |
K | BCL102 |
site_id | AE7 |
Number of Residues | 10 |
Details | binding site for residue BCL I 102 |
Chain | Residue |
F | KGD101 |
G | BCL101 |
H | SER11 |
I | PRO11 |
I | TRP14 |
I | HIS26 |
I | VAL29 |
I | VAL30 |
I | ILE33 |
I | LEU37 |
site_id | AE8 |
Number of Residues | 11 |
Details | binding site for residue BCL G 101 |
Chain | Residue |
D | BCL101 |
F | HIS27 |
F | BCL102 |
G | GLY36 |
G | LEU37 |
G | HIS44 |
G | TRP53 |
G | BCL102 |
H | KGD102 |
I | BCL101 |
I | BCL102 |
site_id | AE9 |
Number of Residues | 10 |
Details | binding site for residue BCL G 102 |
Chain | Residue |
A | KGD101 |
E | BCL101 |
F | PHE8 |
F | SER11 |
G | TRP14 |
G | HIS26 |
G | VAL29 |
G | VAL30 |
G | ILE33 |
G | BCL101 |
site_id | AF1 |
Number of Residues | 10 |
Details | binding site for residue BCL W 101 |
Chain | Residue |
T | KGD101 |
T | BCL103 |
U | BCL101 |
V | ALA23 |
V | ILE26 |
V | HIS27 |
V | BCL101 |
W | GLY36 |
W | HIS44 |
W | TRP53 |
site_id | AF2 |
Number of Residues | 8 |
Details | binding site for residue BCL W 102 |
Chain | Residue |
T | KGD102 |
U | LEU24 |
V | PHE6 |
W | TRP14 |
W | HIS26 |
W | VAL29 |
W | VAL30 |
W | ILE33 |
site_id | AF3 |
Number of Residues | 12 |
Details | binding site for residue BCL U 101 |
Chain | Residue |
R | BCL102 |
T | ALA23 |
T | ILE26 |
T | HIS27 |
T | PHE36 |
T | KGD101 |
U | GLY36 |
U | LEU37 |
U | ALA40 |
U | HIS44 |
U | TRP53 |
W | BCL101 |
site_id | AF4 |
Number of Residues | 9 |
Details | binding site for residue BCL U 102 |
Chain | Residue |
R | KGD101 |
S | BCL101 |
T | PHE8 |
T | SER11 |
U | TRP14 |
U | HIS26 |
U | VAL29 |
U | VAL30 |
U | ILE33 |
site_id | AF5 |
Number of Residues | 10 |
Details | binding site for residue KGD T 101 |
Chain | Residue |
T | HIS27 |
T | BCL103 |
U | BCL101 |
V | GLY19 |
V | MET22 |
V | ILE26 |
V | BCL101 |
W | VAL29 |
W | ILE33 |
W | BCL101 |
site_id | AF6 |
Number of Residues | 11 |
Details | binding site for residue KGD T 102 |
Chain | Residue |
R | LEU24 |
R | HIS27 |
R | BCL102 |
S | BCL101 |
T | THR16 |
T | GLY19 |
T | MET22 |
T | BCL103 |
U | VAL29 |
U | ILE33 |
W | BCL102 |
site_id | AF7 |
Number of Residues | 9 |
Details | binding site for residue BCL T 103 |
Chain | Residue |
L | PHE55 |
T | THR16 |
T | HIS27 |
T | TRP38 |
T | KGD101 |
T | KGD102 |
U | ALA40 |
U | HIS44 |
W | BCL101 |
site_id | AF8 |
Number of Residues | 9 |
Details | binding site for residue BCL S 102 |
Chain | Residue |
N | KGD101 |
Q | ALA43 |
R | SER11 |
R | KGD101 |
S | TRP14 |
S | HIS26 |
S | VAL29 |
S | VAL30 |
S | ILE33 |
site_id | AF9 |
Number of Residues | 12 |
Details | binding site for residue BCL Q 101 |
Chain | Residue |
N | BCL103 |
O | BCL101 |
P | ALA23 |
P | ILE26 |
P | HIS27 |
P | BCL101 |
Q | GLY36 |
Q | LEU37 |
Q | HIS44 |
Q | CYS47 |
Q | TRP53 |
R | KGD101 |
site_id | AG1 |
Number of Residues | 15 |
Details | binding site for residue BCL O 101 |
Chain | Residue |
J | BCL102 |
K | BCL101 |
N | ALA23 |
N | ILE26 |
N | HIS27 |
N | PHE36 |
N | KGD101 |
N | BCL103 |
O | GLY36 |
O | LEU37 |
O | HIS44 |
O | CYS47 |
O | TRP53 |
Q | BCL101 |
Q | BCL102 |
site_id | AG2 |
Number of Residues | 8 |
Details | binding site for residue BCL O 102 |
Chain | Residue |
J | KGD101 |
K | LEU24 |
K | BCL101 |
N | PHE8 |
O | TRP14 |
O | HIS26 |
O | VAL30 |
O | ILE33 |
site_id | AG3 |
Number of Residues | 4 |
Details | binding site for residue BCL V 101 |
Chain | Residue |
T | KGD101 |
V | HIS27 |
V | TRP38 |
W | BCL101 |
site_id | AG4 |
Number of Residues | 9 |
Details | binding site for residue BCL P 101 |
Chain | Residue |
N | KGD101 |
P | THR16 |
P | LEU20 |
P | ALA23 |
P | HIS27 |
P | TRP38 |
Q | BCL101 |
R | PHE6 |
S | BCL101 |
site_id | AG5 |
Number of Residues | 8 |
Details | binding site for residue KGD N 101 |
Chain | Residue |
N | HIS27 |
N | BCL103 |
O | BCL101 |
P | GLY19 |
P | MET22 |
P | BCL101 |
Q | VAL29 |
S | BCL102 |
site_id | AG6 |
Number of Residues | 12 |
Details | binding site for residue KGD N 102 |
Chain | Residue |
J | HIS27 |
J | PHE28 |
J | BCL102 |
K | BCL101 |
N | SER15 |
N | THR16 |
N | LEU18 |
N | GLY19 |
N | MET22 |
N | BCL103 |
O | VAL29 |
Q | BCL102 |
site_id | AG7 |
Number of Residues | 12 |
Details | binding site for residue BCL N 103 |
Chain | Residue |
N | VAL13 |
N | LEU20 |
N | ALA23 |
N | HIS27 |
N | TRP38 |
N | KGD101 |
N | KGD102 |
O | BCL101 |
P | PHE6 |
Q | TRP53 |
Q | BCL101 |
Q | BCL102 |
site_id | AG8 |
Number of Residues | 12 |
Details | binding site for residue KGD J 101 |
Chain | Residue |
H | LEU24 |
H | HIS27 |
H | BCL101 |
I | BCL101 |
J | SER15 |
J | THR16 |
J | LEU18 |
J | GLY19 |
J | MET22 |
J | BCL102 |
N | SER11 |
O | BCL102 |
site_id | AG9 |
Number of Residues | 10 |
Details | binding site for residue BCL J 102 |
Chain | Residue |
J | LEU20 |
J | ALA23 |
J | HIS27 |
J | TRP38 |
J | KGD101 |
K | ILE39 |
K | HIS44 |
K | BCL101 |
N | KGD102 |
O | BCL101 |
site_id | AH1 |
Number of Residues | 12 |
Details | binding site for residue BCL H 101 |
Chain | Residue |
H | VAL13 |
H | THR16 |
H | LEU20 |
H | ALA23 |
H | HIS27 |
H | PHE36 |
H | TRP38 |
H | KGD102 |
I | HIS44 |
I | BCL101 |
J | KGD101 |
K | BCL101 |
site_id | AH2 |
Number of Residues | 11 |
Details | binding site for residue KGD F 101 |
Chain | Residue |
D | LEU24 |
D | HIS27 |
E | BCL101 |
F | THR16 |
F | LEU18 |
F | GLY19 |
F | MET22 |
F | BCL102 |
G | VAL29 |
G | ILE33 |
I | BCL102 |
site_id | AH3 |
Number of Residues | 12 |
Details | binding site for residue BCL F 102 |
Chain | Residue |
F | GLY19 |
F | LEU20 |
F | HIS27 |
F | TRP38 |
F | KGD101 |
G | ALA40 |
G | HIS44 |
G | BCL101 |
H | THR10 |
H | SER15 |
H | KGD102 |
I | BCL101 |
site_id | AH4 |
Number of Residues | 11 |
Details | binding site for residue BCL D 101 |
Chain | Residue |
A | KGD101 |
D | THR16 |
D | LEU20 |
D | HIS27 |
D | LEU31 |
D | TRP38 |
E | ALA40 |
E | HIS44 |
E | BCL101 |
F | VAL14 |
G | BCL101 |
site_id | AH5 |
Number of Residues | 14 |
Details | binding site for residue BCL A 102 |
Chain | Residue |
9 | KGD101 |
A | THR16 |
A | LEU20 |
A | ALA23 |
A | HIS27 |
A | LEU31 |
A | PHE36 |
A | TRP38 |
A | KGD101 |
B | ALA40 |
B | ALA43 |
B | HIS44 |
B | BCL101 |
E | BCL101 |
site_id | AH6 |
Number of Residues | 12 |
Details | binding site for residue KGD 9 101 |
Chain | Residue |
0 | BCL101 |
9 | HIS27 |
9 | BCL103 |
A | THR16 |
A | LEU18 |
A | GLY19 |
A | MET22 |
A | BCL102 |
B | VAL29 |
B | ILE33 |
D | PHE6 |
E | BCL102 |
site_id | AH7 |
Number of Residues | 13 |
Details | binding site for residue BCL 9 103 |
Chain | Residue |
0 | ALA40 |
0 | HIS44 |
0 | CYS47 |
0 | BCL101 |
9 | VAL13 |
9 | HIS27 |
9 | TRP38 |
9 | KGD101 |
9 | KGD102 |
A | PHE6 |
A | VAL14 |
B | BCL101 |
B | BCL102 |
site_id | AH8 |
Number of Residues | 12 |
Details | binding site for residue BCL 7 101 |
Chain | Residue |
0 | BCL101 |
5 | KGD101 |
7 | VAL13 |
7 | THR16 |
7 | HIS27 |
7 | TRP38 |
8 | ALA40 |
8 | HIS44 |
8 | CYS47 |
8 | BCL101 |
9 | VAL14 |
9 | KGD102 |
site_id | AH9 |
Number of Residues | 13 |
Details | binding site for residue BCL 5 102 |
Chain | Residue |
3 | KGD101 |
5 | VAL13 |
5 | THR16 |
5 | LEU20 |
5 | HIS27 |
5 | TRP38 |
5 | KGD101 |
6 | ALA40 |
6 | HIS44 |
6 | BCL101 |
7 | VAL14 |
8 | BCL101 |
8 | BCL102 |
site_id | AI1 |
Number of Residues | 13 |
Details | binding site for residue KGD 3 101 |
Chain | Residue |
3 | LEU24 |
3 | HIS27 |
3 | BCL102 |
4 | BCL101 |
5 | THR16 |
5 | GLY19 |
5 | MET22 |
5 | BCL102 |
6 | VAL29 |
6 | ILE33 |
6 | BCL101 |
7 | PHE6 |
8 | BCL102 |
site_id | AI2 |
Number of Residues | 10 |
Details | binding site for residue BCL 1 101 |
Chain | Residue |
1 | LEU20 |
1 | ALA23 |
1 | HIS27 |
1 | TRP38 |
2 | BCL101 |
3 | SER11 |
3 | SER15 |
3 | KGD103 |
4 | BCL101 |
4 | BCL102 |
site_id | AI3 |
Number of Residues | 16 |
Details | binding site for residue MQE M 701 |
Chain | Residue |
L | PHE67 |
L | ILE77 |
L | ILE81 |
L | VAL84 |
L | LEU88 |
L | ARG142 |
M | MET541 |
M | HIS542 |
M | THR545 |
M | TRP575 |
M | TRP581 |
M | ALA583 |
M | ASN584 |
M | ILE588 |
P | LEU24 |
P | LEU25 |
site_id | AI4 |
Number of Residues | 14 |
Details | binding site for residue BCL M 702 |
Chain | Residue |
L | PHE220 |
L | BCL1001 |
L | BCL1002 |
M | PHE386 |
M | LEU479 |
M | SER513 |
M | TYR520 |
M | HIS525 |
M | SER528 |
M | LEU532 |
M | GLY603 |
M | LEU607 |
M | BPH703 |
M | BPH704 |
site_id | AI5 |
Number of Residues | 11 |
Details | binding site for residue BPH M 703 |
Chain | Residue |
L | ALA213 |
L | ILE216 |
L | THR217 |
L | BCL1002 |
M | TYR484 |
M | PHE502 |
M | ARG503 |
M | ILE505 |
M | LEU506 |
M | BCL702 |
M | BPH704 |
site_id | AI6 |
Number of Residues | 12 |
Details | binding site for residue BPH M 704 |
Chain | Residue |
L | PHE220 |
L | THR223 |
L | LEU224 |
L | HIS227 |
L | MET228 |
L | LEU254 |
M | PHE386 |
M | TRP452 |
M | PHE473 |
M | ALA476 |
M | BCL702 |
M | BPH703 |
site_id | AI7 |
Number of Residues | 17 |
Details | binding site for Di-peptide KGD 3 103 and GLY 3 19 |
Chain | Residue |
1 | LEU24 |
1 | HIS27 |
1 | BCL101 |
2 | BCL101 |
3 | SER15 |
3 | THR16 |
3 | LEU17 |
3 | LEU18 |
3 | LEU20 |
3 | VAL21 |
3 | MET22 |
3 | ALA23 |
3 | BCL102 |
4 | VAL29 |
4 | ILE33 |
4 | BCL101 |
6 | BCL102 |
site_id | AI8 |
Number of Residues | 27 |
Details | binding site for Di-peptide KGD 3 103 and LEU 1 24 |
Chain | Residue |
1 | LEU20 |
1 | VAL21 |
1 | MET22 |
1 | ALA23 |
1 | LEU25 |
1 | ILE26 |
1 | HIS27 |
1 | PHE28 |
1 | BCL101 |
2 | BCL101 |
3 | THR16 |
3 | LEU18 |
3 | GLY19 |
3 | LEU20 |
3 | VAL21 |
3 | MET22 |
3 | ALA23 |
3 | LEU25 |
3 | ILE26 |
3 | HIS27 |
3 | PHE28 |
3 | KGD101 |
3 | BCL102 |
4 | VAL29 |
4 | ILE33 |
4 | BCL101 |
6 | BCL102 |
site_id | AI9 |
Number of Residues | 28 |
Details | binding site for Di-peptide KGD 3 103 and HIS 1 27 |
Chain | Residue |
1 | ALA23 |
1 | LEU24 |
1 | LEU25 |
1 | ILE26 |
1 | PHE28 |
1 | VAL29 |
1 | VAL30 |
1 | LEU31 |
1 | BCL101 |
2 | BCL101 |
3 | THR16 |
3 | LEU18 |
3 | GLY19 |
3 | MET22 |
3 | ALA23 |
3 | LEU24 |
3 | LEU25 |
3 | ILE26 |
3 | PHE28 |
3 | VAL29 |
3 | VAL30 |
3 | LEU31 |
3 | KGD101 |
3 | BCL102 |
4 | VAL29 |
4 | ILE33 |
4 | BCL101 |
6 | BCL102 |
site_id | AJ1 |
Number of Residues | 30 |
Details | binding site for residues BCL 4 101 and BCL 3 102 |
Chain | Residue |
1 | BCL101 |
2 | BCL101 |
3 | ALA23 |
3 | LEU24 |
3 | HIS27 |
3 | TRP38 |
3 | KGD103 |
4 | TRP14 |
4 | HIS26 |
4 | VAL29 |
4 | VAL30 |
4 | ILE33 |
4 | TYR34 |
4 | GLY36 |
4 | ALA40 |
4 | ALA43 |
4 | HIS44 |
4 | CYS47 |
4 | TRP53 |
5 | PHE6 |
5 | THR16 |
5 | GLY19 |
5 | MET22 |
5 | BCL102 |
6 | VAL29 |
6 | ILE33 |
6 | BCL101 |
6 | BCL102 |
7 | PHE6 |
8 | BCL102 |
site_id | AJ2 |
Number of Residues | 16 |
Details | binding site for Di-peptide KGD 5 101 and HIS 5 27 |
Chain | Residue |
0 | BCL102 |
5 | ALA23 |
5 | LEU24 |
5 | LEU25 |
5 | ILE26 |
5 | PHE28 |
5 | BCL102 |
6 | BCL101 |
7 | VAL12 |
7 | SER15 |
7 | THR16 |
7 | GLY19 |
7 | MET22 |
7 | ILE26 |
7 | BCL101 |
8 | VAL29 |
site_id | AJ3 |
Number of Residues | 18 |
Details | binding site for Di-peptide KGD 9 102 and MET 9 22 |
Chain | Residue |
0 | VAL29 |
7 | LEU24 |
7 | HIS27 |
7 | PHE28 |
7 | BCL101 |
8 | BCL101 |
9 | SER15 |
9 | THR16 |
9 | LEU18 |
9 | GLY19 |
9 | LEU20 |
9 | VAL21 |
9 | ALA23 |
9 | LEU24 |
9 | LEU25 |
9 | ILE26 |
9 | BCL103 |
B | BCL102 |
site_id | AJ4 |
Number of Residues | 18 |
Details | binding site for Di-peptide KGD A 101 and HIS A 27 |
Chain | Residue |
A | ALA23 |
A | LEU24 |
A | LEU25 |
A | ILE26 |
A | PHE28 |
A | VAL29 |
A | VAL30 |
A | LEU31 |
A | BCL102 |
B | BCL101 |
D | LEU18 |
D | GLY19 |
D | MET22 |
D | BCL101 |
E | VAL29 |
E | ILE33 |
E | BCL101 |
G | BCL102 |
site_id | AJ5 |
Number of Residues | 12 |
Details | binding site for Di-peptide HEM C 502 and CYS C 171 |
Chain | Residue |
C | TYR120 |
C | MET145 |
C | MET148 |
C | THR170 |
C | ALA172 |
C | THR173 |
C | CYS174 |
C | HIS175 |
C | GLY181 |
C | LEU182 |
C | ILE285 |
C | MET286 |
site_id | AJ6 |
Number of Residues | 12 |
Details | binding site for Di-peptide HEM C 502 and CYS C 171 |
Chain | Residue |
C | TYR120 |
C | MET145 |
C | MET148 |
C | THR170 |
C | ALA172 |
C | THR173 |
C | CYS174 |
C | HIS175 |
C | GLY181 |
C | LEU182 |
C | ILE285 |
C | MET286 |
site_id | AJ7 |
Number of Residues | 32 |
Details | binding site for Di-peptide KGD H 102 and HIS F 27 |
Chain | Residue |
F | GLY19 |
F | LEU20 |
F | ALA23 |
F | LEU24 |
F | LEU25 |
F | ILE26 |
F | PHE28 |
F | LEU31 |
F | TRP38 |
F | KGD101 |
G | ALA40 |
G | HIS44 |
G | BCL101 |
H | THR10 |
H | SER15 |
H | THR16 |
H | LEU18 |
H | GLY19 |
H | MET22 |
H | ALA23 |
H | LEU24 |
H | LEU25 |
H | ILE26 |
H | PHE28 |
H | VAL29 |
H | VAL30 |
H | LEU31 |
H | BCL101 |
I | ILE33 |
I | BCL101 |
J | KGD101 |
K | BCL102 |
site_id | AJ8 |
Number of Residues | 16 |
Details | binding site for Di-peptide KGD H 102 and GLY H 19 |
Chain | Residue |
F | LEU24 |
F | HIS27 |
F | BCL102 |
G | BCL101 |
H | SER15 |
H | THR16 |
H | LEU17 |
H | LEU18 |
H | LEU20 |
H | VAL21 |
H | MET22 |
H | ALA23 |
H | BCL101 |
I | ILE33 |
I | BCL101 |
K | BCL102 |
site_id | AJ9 |
Number of Residues | 14 |
Details | binding site for Di-peptide BCL Q 102 and VAL Q 30 |
Chain | Residue |
N | KGD102 |
N | BCL103 |
O | BCL101 |
P | PHE8 |
P | SER11 |
Q | TRP14 |
Q | HIS26 |
Q | ASP27 |
Q | ILE28 |
Q | VAL29 |
Q | LYS31 |
Q | THR32 |
Q | ILE33 |
Q | TYR34 |
site_id | AK1 |
Number of Residues | 17 |
Details | binding site for Di-peptide KGD R 101 and GLY R 19 |
Chain | Residue |
P | LEU24 |
P | HIS27 |
Q | BCL101 |
R | SER15 |
R | THR16 |
R | LEU17 |
R | LEU18 |
R | LEU20 |
R | VAL21 |
R | MET22 |
R | ALA23 |
R | BCL102 |
S | VAL29 |
S | BCL101 |
S | BCL102 |
T | SER11 |
U | BCL102 |
site_id | AK2 |
Number of Residues | 32 |
Details | binding site for residues BCL S 101 and BCL R 102 |
Chain | Residue |
L | ILE78 |
N | KGD101 |
P | LEU24 |
P | HIS27 |
P | BCL101 |
Q | ALA43 |
Q | BCL101 |
R | SER11 |
R | THR16 |
R | LEU18 |
R | GLY19 |
R | LEU20 |
R | MET22 |
R | ILE26 |
R | HIS27 |
R | TRP38 |
S | TRP14 |
S | HIS26 |
S | VAL29 |
S | VAL30 |
S | ILE33 |
S | GLY36 |
S | ALA40 |
S | HIS44 |
S | CYS47 |
S | TRP53 |
T | SER11 |
T | LEU18 |
T | KGD102 |
U | TRP53 |
U | BCL101 |
U | BCL102 |
Functional Information from PROSITE/UniProt
site_id | PS00244 |
Number of Residues | 27 |
Details | REACTION_CENTER Photosynthetic reaction center proteins signature. NfyynPfHmlSiffllgstlllAmHGA |
Chain | Residue | Details |
M | ASN518-ALA544 |
site_id | PS00968 |
Number of Residues | 19 |
Details | ANTENNA_COMP_ALPHA Antenna complexes alpha subunits signature. VmALlIHfvvLSSgafNWL |
Chain | Residue | Details |
A | VAL21-LEU39 |