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5YQ1

Crystal structure of E.coli aminopeptidase N in complex with O-Methyl-L-tyrosine

Functional Information from GO Data
ChainGOidnamespacecontents
A0004177molecular_functionaminopeptidase activity
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006508biological_processproteolysis
A0008237molecular_functionmetallopeptidase activity
A0008270molecular_functionzinc ion binding
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 901
ChainResidue
AHIS297
AHIS301
AGLU320
A0A1902

site_idAC2
Number of Residues15
Detailsbinding site for residue 0A1 A 902
ChainResidue
AGLU264
AHIS297
AGLU298
AHIS301
AGLU320
ATYR376
ATYR381
AGLN821
AZN901
AHOH1385
AGLN119
AGLU121
AMET260
AALA262
AMET263

site_idAC3
Number of Residues8
Detailsbinding site for residue MLI A 903
ChainResidue
AARG641
AGLU642
ATHR645
AARG686
AALA722
AHOH1116
AHOH1123
AHOH1306

site_idAC4
Number of Residues5
Detailsbinding site for residue MLI A 904
ChainResidue
APHE704
AALA713
ALYS738
ATRP739
AHOH1021

site_idAC5
Number of Residues5
Detailsbinding site for residue MLI A 905
ChainResidue
ALYS451
AHOH1058
AHOH1098
AHOH1443
AHOH1506

site_idAC6
Number of Residues4
Detailsbinding site for residue GOL A 907
ChainResidue
ASER701
AHIS705
AALA730
AGLU734

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL A 908
ChainResidue
AASN579
AARG582
AHIS583
AGLN587
APRO588
ALEU589
AGLU639
AALA643

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL A 909
ChainResidue
AALA531
ALEU532
ATRP546
ALEU554
AASP566
AALA567
ASER570

site_idAC9
Number of Residues6
Detailsbinding site for residue GOL A 910
ChainResidue
AARG161
AGLN527
AHOH1005
AHOH1474
AHOH1521
AHOH1556

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL A 911
ChainResidue
ALEU61
AVAL62
ATRP74
AARG669
AGLU671
AHOH1278

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VIGHEYFHNW
ChainResidueDetails
AVAL294-TRP303

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000305|PubMed:16885166, ECO:0000305|PubMed:18416562, ECO:0000305|PubMed:19622865
ChainResidueDetails
AGLU298

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
AGLU121
AGLY261
AHIS297
AHIS301
AGLU320

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000305
ChainResidueDetails
ATYR381

225946

PDB entries from 2024-10-09

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