Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5YPQ

Crystal structure of sulfated dehydroquinate dehydratase from Acinetobacter baumannii at 2.65 A resolution

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003855	molecular_function	3-dehydroquinate dehydratase activity
A	0008652	biological_process	amino acid biosynthetic process
A	0009073	biological_process	aromatic amino acid family biosynthetic process
A	0009423	biological_process	chorismate biosynthetic process
A	0016829	molecular_function	lyase activity
A	0019631	biological_process	quinate catabolic process
B	0003855	molecular_function	3-dehydroquinate dehydratase activity
B	0008652	biological_process	amino acid biosynthetic process
B	0009073	biological_process	aromatic amino acid family biosynthetic process
B	0009423	biological_process	chorismate biosynthetic process
B	0016829	molecular_function	lyase activity
B	0019631	biological_process	quinate catabolic process
C	0003855	molecular_function	3-dehydroquinate dehydratase activity
C	0008652	biological_process	amino acid biosynthetic process
C	0009073	biological_process	aromatic amino acid family biosynthetic process
C	0009423	biological_process	chorismate biosynthetic process
C	0016829	molecular_function	lyase activity
C	0019631	biological_process	quinate catabolic process
D	0003855	molecular_function	3-dehydroquinate dehydratase activity
D	0008652	biological_process	amino acid biosynthetic process
D	0009073	biological_process	aromatic amino acid family biosynthetic process
D	0009423	biological_process	chorismate biosynthetic process
D	0016829	molecular_function	lyase activity
D	0019631	biological_process	quinate catabolic process
E	0003855	molecular_function	3-dehydroquinate dehydratase activity
E	0008652	biological_process	amino acid biosynthetic process
E	0009073	biological_process	aromatic amino acid family biosynthetic process
E	0009423	biological_process	chorismate biosynthetic process
E	0016829	molecular_function	lyase activity
E	0019631	biological_process	quinate catabolic process
F	0003855	molecular_function	3-dehydroquinate dehydratase activity
F	0008652	biological_process	amino acid biosynthetic process
F	0009073	biological_process	aromatic amino acid family biosynthetic process
F	0009423	biological_process	chorismate biosynthetic process
F	0016829	molecular_function	lyase activity
F	0019631	biological_process	quinate catabolic process
G	0003855	molecular_function	3-dehydroquinate dehydratase activity
G	0008652	biological_process	amino acid biosynthetic process
G	0009073	biological_process	aromatic amino acid family biosynthetic process
G	0009423	biological_process	chorismate biosynthetic process
G	0016829	molecular_function	lyase activity
G	0019631	biological_process	quinate catabolic process
H	0003855	molecular_function	3-dehydroquinate dehydratase activity
H	0008652	biological_process	amino acid biosynthetic process
H	0009073	biological_process	aromatic amino acid family biosynthetic process
H	0009423	biological_process	chorismate biosynthetic process
H	0016829	molecular_function	lyase activity
H	0019631	biological_process	quinate catabolic process
I	0003855	molecular_function	3-dehydroquinate dehydratase activity
I	0008652	biological_process	amino acid biosynthetic process
I	0009073	biological_process	aromatic amino acid family biosynthetic process
I	0009423	biological_process	chorismate biosynthetic process
I	0016829	molecular_function	lyase activity
I	0019631	biological_process	quinate catabolic process
J	0003855	molecular_function	3-dehydroquinate dehydratase activity
J	0008652	biological_process	amino acid biosynthetic process
J	0009073	biological_process	aromatic amino acid family biosynthetic process
J	0009423	biological_process	chorismate biosynthetic process
J	0016829	molecular_function	lyase activity
J	0019631	biological_process	quinate catabolic process
K	0003855	molecular_function	3-dehydroquinate dehydratase activity
K	0008652	biological_process	amino acid biosynthetic process
K	0009073	biological_process	aromatic amino acid family biosynthetic process
K	0009423	biological_process	chorismate biosynthetic process
K	0016829	molecular_function	lyase activity
K	0019631	biological_process	quinate catabolic process
L	0003855	molecular_function	3-dehydroquinate dehydratase activity
L	0008652	biological_process	amino acid biosynthetic process
L	0009073	biological_process	aromatic amino acid family biosynthetic process
L	0009423	biological_process	chorismate biosynthetic process
L	0016829	molecular_function	lyase activity
L	0019631	biological_process	quinate catabolic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue SO4 A 201

Chain	Residue
A	ASN76
A	HIS102
A	LEU103
A	SER104
A	HOH305

site_id	AC2
Number of Residues	5
Details	binding site for residue SO4 B 201

Chain	Residue
B	HOH317
B	ASN76
B	HIS102
B	LEU103
B	SER104

site_id	AC3
Number of Residues	7
Details	binding site for residue GOL B 202

Chain	Residue
A	GLU55
A	THR83
B	GLU55
B	THR83
B	SER84
C	GLU55
C	THR83

site_id	AC4
Number of Residues	5
Details	binding site for residue SO4 C 201

Chain	Residue
C	ASN76
C	HIS102
C	LEU103
C	SER104
C	HOH303

site_id	AC5
Number of Residues	5
Details	binding site for residue SO4 D 201

Chain	Residue
D	ASN76
D	HIS102
D	LEU103
D	SER104
D	HOH312

site_id	AC6
Number of Residues	4
Details	binding site for residue SO4 E 201

Chain	Residue
E	ASN76
E	HIS102
E	LEU103
E	SER104

site_id	AC7
Number of Residues	5
Details	binding site for residue SO4 F 201

Chain	Residue
F	ASN76
F	HIS102
F	LEU103
F	SER104
F	HOH303

site_id	AC8
Number of Residues	8
Details	binding site for residue GOL F 202

Chain	Residue
E	GLU55
E	THR83
F	GLU55
F	THR83
F	SER84
G	GLU55
G	THR83
G	SER84

site_id	AC9
Number of Residues	5
Details	binding site for residue SO4 G 201

Chain	Residue
G	ASN76
G	HIS102
G	LEU103
G	SER104
G	HOH311

site_id	AD1
Number of Residues	6
Details	binding site for residue SO4 H 201

Chain	Residue
H	ASN76
H	ALA78
H	HIS102
H	LEU103
H	SER104
H	HOH308

site_id	AD2
Number of Residues	6
Details	binding site for residue GOL H 202

Chain	Residue
D	GLU55
D	THR83
H	GLU55
H	THR83
L	GLU55
L	THR83

site_id	AD3
Number of Residues	4
Details	binding site for residue SO4 I 201

Chain	Residue
I	ASN76
I	HIS102
I	LEU103
I	SER104

site_id	AD4
Number of Residues	5
Details	binding site for residue SO4 J 201

Chain	Residue
J	ASN76
J	HIS102
J	LEU103
J	SER104
J	HOH315

site_id	AD5
Number of Residues	7
Details	binding site for residue SO4 K 201

Chain	Residue
K	ASN76
K	ALA78
K	HIS102
K	LEU103
K	SER104
K	HOH302
K	HOH313

site_id	AD6
Number of Residues	8
Details	binding site for residue GOL K 202

Chain	Residue
I	GLU55
I	THR83
J	GLU55
J	THR83
J	HOH302
K	GLU55
K	THR83
K	SER84

site_id	AD7
Number of Residues	5
Details	binding site for residue SO4 L 201

Chain	Residue
L	ASN76
L	HIS102
L	LEU103
L	SER104
L	HOH307

Functional Information from PROSITE/UniProt

site_id	PS01029
Number of Residues	18
Details	DEHYDROQUINASE_II Dehydroquinase class II signature. IHGPNLnlLGkREpevYG

Chain	Residue	Details
A	ILE8-GLY25

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	12
Details	Active site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_00169","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	12
Details	Active site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_00169","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	60
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00169","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	12
Details	Site: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_00169","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)