5YN3
Crystal structure of xylose isomerase from Piromyces sp. E2
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0009045 | molecular_function | xylose isomerase activity |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0042732 | biological_process | D-xylose metabolic process |
| A | 0044577 | biological_process | xylose catabolic process to ethanol |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0009045 | molecular_function | xylose isomerase activity |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0042732 | biological_process | D-xylose metabolic process |
| B | 0044577 | biological_process | xylose catabolic process to ethanol |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0009045 | molecular_function | xylose isomerase activity |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0042732 | biological_process | D-xylose metabolic process |
| C | 0044577 | biological_process | xylose catabolic process to ethanol |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0009045 | molecular_function | xylose isomerase activity |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0042732 | biological_process | D-xylose metabolic process |
| D | 0044577 | biological_process | xylose catabolic process to ethanol |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MN A 501 |
| Chain | Residue |
| A | GLU233 |
| A | GLU269 |
| A | ASP297 |
| A | ASP340 |
| A | GOL503 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue MN A 502 |
| Chain | Residue |
| A | HOH649 |
| A | GLU269 |
| A | HIS272 |
| A | ASP308 |
| A | ASP310 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue GOL A 503 |
| Chain | Residue |
| A | HIS102 |
| A | TRP140 |
| A | TRP189 |
| A | GLU233 |
| A | ASP297 |
| A | ASP340 |
| A | MN501 |
| A | HOH613 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue GOL A 504 |
| Chain | Residue |
| A | GLU33 |
| A | GLY36 |
| A | GLU407 |
| D | SER223 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue MN B 501 |
| Chain | Residue |
| B | GLU269 |
| B | HIS272 |
| B | ASP308 |
| B | ASP310 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue MN B 502 |
| Chain | Residue |
| B | GLU233 |
| B | GLU269 |
| B | ASP297 |
| B | ASP340 |
| B | GOL503 |
| site_id | AC7 |
| Number of Residues | 10 |
| Details | binding site for residue GOL B 503 |
| Chain | Residue |
| B | TRP50 |
| B | HIS102 |
| B | TRP140 |
| B | PHE146 |
| B | TRP189 |
| B | GLU233 |
| B | ASP297 |
| B | ASP340 |
| B | MN502 |
| B | HOH608 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | binding site for residue MN C 501 |
| Chain | Residue |
| C | GLU233 |
| C | GLU269 |
| C | ASP297 |
| C | ASP340 |
| C | GOL503 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | binding site for residue MN C 502 |
| Chain | Residue |
| C | GLU269 |
| C | HIS272 |
| C | ASP308 |
| C | ASP310 |
| C | ASP340 |
| C | HOH632 |
| site_id | AD1 |
| Number of Residues | 7 |
| Details | binding site for residue GOL C 503 |
| Chain | Residue |
| C | HIS102 |
| C | TRP140 |
| C | THR142 |
| C | TRP189 |
| C | GLU233 |
| C | ASP297 |
| C | MN501 |
| site_id | AD2 |
| Number of Residues | 5 |
| Details | binding site for residue MN D 501 |
| Chain | Residue |
| D | GLU233 |
| D | GLU269 |
| D | ASP297 |
| D | ASP340 |
| D | GOL503 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue MN D 502 |
| Chain | Residue |
| D | GLU269 |
| D | HIS272 |
| D | ASP308 |
| D | ASP310 |
| site_id | AD4 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 503 |
| Chain | Residue |
| D | HIS102 |
| D | TRP140 |
| D | TRP189 |
| D | GLU233 |
| D | ASP297 |
| D | ASP340 |
| D | MN501 |
