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5YHF

Crystal structure of SecDF in Super-membrane-facing form

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0006605biological_processprotein targeting
A0006886biological_processintracellular protein transport
A0015031biological_processprotein transport
A0015450molecular_functionprotein-transporting ATPase activity
A0043952biological_processprotein transport by the Sec complex
A0065002biological_processintracellular protein transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue OLC A 801
ChainResidue
AALA18
APHE21
ATRP26
ALEU311
AGLY314
ALEU315
AGLY318
AVAL408
AOLC802

site_idAC2
Number of Residues4
Detailsbinding site for residue OLC A 802
ChainResidue
ATHR371
AMET375
AVAL411
AOLC801

site_idAC3
Number of Residues4
Detailsbinding site for residue OLC A 803
ChainResidue
ASER8
ALEU313
AHIS420
AARG424

site_idAC4
Number of Residues2
Detailsbinding site for residue OLC A 804
ChainResidue
ALEU313
ALEU335

site_idAC5
Number of Residues5
Detailsbinding site for residue OLC A 805
ChainResidue
AALA321
ATHR322
AILE379
ALEU382
AALA386

site_idAC6
Number of Residues5
Detailsbinding site for residue PEG A 806
ChainResidue
APRO216
AILE222
AGLN226
AALA227
AVAL228

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues23
DetailsTRANSMEM: Helical; Name=1 => ECO:0000305
ChainResidueDetails
AMET1-LYS24

site_idSWS_FT_FI2
Number of Residues359
DetailsTOPO_DOM: Periplasmic => ECO:0000305
ChainResidueDetails
APRO25-GLN268
ALEU316-THR324
ATYR391-VAL396
ALYS469-GLU565
AGLY616-SER620
ALEU689-SER692

site_idSWS_FT_FI3
Number of Residues24
DetailsTRANSMEM: Helical; Name=2 => ECO:0000305
ChainResidueDetails
AASP269-TYR293

site_idSWS_FT_FI4
Number of Residues21
DetailsTRANSMEM: Helical; Name=3 => ECO:0000305
ChainResidueDetails
AGLY294-LEU315

site_idSWS_FT_FI5
Number of Residues22
DetailsTRANSMEM: Helical; Name=4 => ECO:0000305
ChainResidueDetails
ALEU325-GLU347

site_idSWS_FT_FI6
Number of Residues54
DetailsTOPO_DOM: Cytoplasmic => ECO:0000305
ChainResidueDetails
AARG348-ARG360
AALA426-PHE444
AGLU647-LEU660
ALYS724-ALA735

site_idSWS_FT_FI7
Number of Residues29
DetailsTRANSMEM: Helical; Name=5 => ECO:0000305
ChainResidueDetails
AGLN361-GLN390

site_idSWS_FT_FI8
Number of Residues28
DetailsTRANSMEM: Helical; Name=6 => ECO:0000305
ChainResidueDetails
AARG397-LEU425

site_idSWS_FT_FI9
Number of Residues23
DetailsTRANSMEM: Helical; Name=7 => ECO:0000305
ChainResidueDetails
AMET445-ALA468

site_idSWS_FT_FI10
Number of Residues23
DetailsTRANSMEM: Helical; Name=8 => ECO:0000305
ChainResidueDetails
ALEU566-PHE589

site_idSWS_FT_FI11
Number of Residues25
DetailsTRANSMEM: Helical; Name=9 => ECO:0000305
ChainResidueDetails
AASP590-LEU615

site_idSWS_FT_FI12
Number of Residues25
DetailsTRANSMEM: Helical; Name=10 => ECO:0000305
ChainResidueDetails
AILE621-ARG646

site_idSWS_FT_FI13
Number of Residues27
DetailsTRANSMEM: Helical; Name=11 => ECO:0000305
ChainResidueDetails
AVAL661-PHE688

site_idSWS_FT_FI14
Number of Residues30
DetailsTRANSMEM: Helical; Name=12 => ECO:0000305
ChainResidueDetails
AVAL693-TRP723

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PDB entries from 2024-07-17

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