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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5YEF

Crystal structure of CTCF ZFs2-8-Hs5-1aE

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN A 501

Chain	Residue
A	CYS324
A	CYS327
A	HIS340
A	HIS345

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN A 502

Chain	Residue
A	CYS353
A	CYS356
A	HIS369
A	HIS373

site_id	AC3
Number of Residues	4
Details	binding site for residue ZN A 503

Chain	Residue
A	CYS384
A	HIS397
A	HIS401
A	CYS381

site_id	AC4
Number of Residues	4
Details	binding site for residue ZN A 504

Chain	Residue
A	CYS409
A	CYS412
A	HIS425
A	HIS430

site_id	AC5
Number of Residues	4
Details	binding site for residue ZN A 505

Chain	Residue
A	CYS439
A	CYS442
A	HIS455
A	HIS460

site_id	AC6
Number of Residues	4
Details	binding site for residue ZN A 506

Chain	Residue
A	CYS469
A	CYS472
A	HIS485
A	HIS489

site_id	AC7
Number of Residues	4
Details	binding site for residue ZN B 501

Chain	Residue
B	CYS324
B	CYS327
B	HIS340
B	HIS345

site_id	AC8
Number of Residues	4
Details	binding site for residue ZN B 502

Chain	Residue
B	CYS353
B	CYS356
B	HIS369
B	HIS373

site_id	AC9
Number of Residues	4
Details	binding site for residue ZN B 503

Chain	Residue
B	CYS381
B	CYS384
B	HIS397
B	HIS401

site_id	AD1
Number of Residues	4
Details	binding site for residue ZN B 504

Chain	Residue
B	CYS409
B	CYS412
B	HIS425
B	HIS430

site_id	AD2
Number of Residues	4
Details	binding site for residue ZN B 505

Chain	Residue
B	CYS439
B	CYS442
B	HIS455
B	HIS460

site_id	AD3
Number of Residues	4
Details	binding site for residue ZN B 506

Chain	Residue
B	CYS469
B	CYS472
B	HIS485
B	HIS489

site_id	AD4
Number of Residues	4
Details	binding site for residue ZN G 501

Chain	Residue
G	CYS324
G	CYS327
G	HIS340
G	HIS345

site_id	AD5
Number of Residues	6
Details	binding site for residue ZN G 502

Chain	Residue
G	CYS353
G	SER354
G	MET355
G	CYS356
G	HIS369
G	HIS373

site_id	AD6
Number of Residues	4
Details	binding site for residue ZN G 503

Chain	Residue
G	CYS381
G	CYS384
G	HIS397
G	HIS401

site_id	AD7
Number of Residues	4
Details	binding site for residue ZN G 504

Chain	Residue
G	CYS409
G	CYS412
G	HIS425
G	HIS430

site_id	AD8
Number of Residues	4
Details	binding site for residue ZN G 505

Chain	Residue
G	CYS439
G	CYS442
G	HIS455
G	HIS460

site_id	AD9
Number of Residues	4
Details	binding site for residue ZN G 506

Chain	Residue
G	CYS469
G	CYS472
G	HIS485
G	HIS489

site_id	AE1
Number of Residues	4
Details	binding site for residue ZN J 501

Chain	Residue
J	CYS324
J	CYS327
J	HIS340
J	HIS345

site_id	AE2
Number of Residues	4
Details	binding site for residue ZN J 502

Chain	Residue
J	CYS353
J	CYS356
J	HIS369
J	HIS373

site_id	AE3
Number of Residues	4
Details	binding site for residue ZN J 503

Chain	Residue
J	CYS381
J	CYS384
J	HIS397
J	HIS401

site_id	AE4
Number of Residues	4
Details	binding site for residue ZN J 504

Chain	Residue
J	CYS409
J	CYS412
J	HIS425
J	HIS430

site_id	AE5
Number of Residues	4
Details	binding site for residue ZN J 505

Chain	Residue
J	CYS439
J	CYS442
J	HIS455
J	HIS460

site_id	AE6
Number of Residues	4
Details	binding site for residue ZN J 506

Chain	Residue
J	CYS469
J	CYS472
J	HIS485
J	HIS489

Functional Information from PROSITE/UniProt

site_id	PS00028
Number of Residues	21
Details	ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Chl..CgraFrtvtllrnHlnt..H

Chain	Residue	Details
A	CYS296-HIS316
A	CYS324-HIS345
A	CYS409-HIS430
A	CYS439-HIS460
A	CYS469-HIS489

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	88
Details	ZN_FING: C2H2-type 2 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	HIS294-HIS316
B	HIS294-HIS316
G	HIS294-HIS316
J	HIS294-HIS316

site_id	SWS_FT_FI2
Number of Residues	92
Details	ZN_FING: C2H2-type 3 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	HIS322-HIS345
B	HIS322-HIS345
G	HIS322-HIS345
J	HIS322-HIS345

site_id	SWS_FT_FI3
Number of Residues	88
Details	ZN_FING: C2H2-type 4 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	PHE351-HIS373
B	PHE351-HIS373
G	PHE351-HIS373
J	PHE351-HIS373

site_id	SWS_FT_FI4
Number of Residues	88
Details	ZN_FING: C2H2-type 5 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	PHE379-HIS401
B	PHE379-HIS401
G	PHE379-HIS401
J	PHE379-HIS401

site_id	SWS_FT_FI5
Number of Residues	92
Details	ZN_FING: C2H2-type 6 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	TYR407-HIS430
B	TYR407-HIS430
G	TYR407-HIS430
J	TYR407-HIS430

site_id	SWS_FT_FI6
Number of Residues	92
Details	ZN_FING: C2H2-type 7 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	PHE437-HIS460
B	PHE437-HIS460
G	PHE437-HIS460
J	PHE437-HIS460

site_id	SWS_FT_FI7
Number of Residues	88
Details	ZN_FING: C2H2-type 8 => ECO:0000255\|PROSITE-ProRule:PRU00042

Chain	Residue	Details
A	LYS467-HIS489
B	LYS467-HIS489
G	LYS467-HIS489
J	LYS467-HIS489

site_id	SWS_FT_FI8
Number of Residues	4
Details	MOD_RES: Phosphothreonine => ECO:0007744\|PubMed:20068231

Chain	Residue	Details
A	THR317
B	THR317
G	THR317
J	THR317

site_id	SWS_FT_FI9
Number of Residues	4
Details	MOD_RES: Phosphothreonine => ECO:0007744\|PubMed:18669648

Chain	Residue	Details
A	THR374
B	THR374
G	THR374
J	THR374

site_id	SWS_FT_FI10
Number of Residues	4
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18669648

Chain	Residue	Details
A	SER402
B	SER402
G	SER402
J	SER402

221051

PDB entries from 2024-06-12

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