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5YBI

Structure of the bacterial pathogens ATPase with substrate AMPPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0009058biological_processbiosynthetic process
A0016887molecular_functionATP hydrolysis activity
A0030254biological_processprotein secretion by the type III secretion system
A0030257cellular_componenttype III protein secretion system complex
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0009058biological_processbiosynthetic process
B0016887molecular_functionATP hydrolysis activity
B0030254biological_processprotein secretion by the type III secretion system
B0030257cellular_componenttype III protein secretion system complex
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 501
ChainResidue
ATYR328
ASER330
AARG331
AASN332
ALYS346

site_idAC2
Number of Residues7
Detailsbinding site for residue SO4 A 502
ChainResidue
AHOH631
AHOH652
AHOH696
AARG223
AARG253
AARG256
AHOH608

site_idAC3
Number of Residues5
Detailsbinding site for residue SO4 A 503
ChainResidue
AHIS-2
AHIS84
AHOH626
AHOH674
BLYS105

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 504
ChainResidue
AASP357
AGLU358
AARG361
AHOH675

site_idAC5
Number of Residues15
Detailsbinding site for residue ANP A 505
ChainResidue
AALA161
AGLY162
ACYS163
AGLY164
ALYS165
ATHR166
APHE167
APHE339
AGLN410
ATYR412
AMG506
AMG512
AHOH601
AHOH616
AHOH630

site_idAC6
Number of Residues3
Detailsbinding site for residue MG A 506
ChainResidue
ATHR166
AANP505
AHOH683

site_idAC7
Number of Residues4
Detailsbinding site for residue MG A 507
ChainResidue
AASP324
BLYS293
BHOH661
BHOH745

site_idAC8
Number of Residues1
Detailsbinding site for residue MG A 508
ChainResidue
ASER220

site_idAC9
Number of Residues2
Detailsbinding site for residue MG A 509
ChainResidue
AGLY415
AHOH739

site_idAD1
Number of Residues4
Detailsbinding site for residue MG A 510
ChainResidue
AALA130
AGLY290
ALYS291
BTYR126

site_idAD2
Number of Residues2
Detailsbinding site for residue MG A 511
ChainResidue
ALYS293
AHOH740

site_idAD3
Number of Residues3
Detailsbinding site for residue MG A 512
ChainResidue
AMSE171
APRO340
AANP505

site_idAD4
Number of Residues4
Detailsbinding site for residue MG A 513
ChainResidue
ATHR417
ATYR418
AGLU419
AHOH750

site_idAD5
Number of Residues5
Detailsbinding site for residue MG A 514
ChainResidue
AGLN86
AVAL96
AGLY100
AHOH639
AHOH701

site_idAD6
Number of Residues4
Detailsbinding site for residue MG A 515
ChainResidue
ALEU146
ALEU147
ASER344
AARG368

site_idAD7
Number of Residues4
Detailsbinding site for residue MG A 516
ChainResidue
AMSE169
AASN170
ATHR196
AHOH678

site_idAD8
Number of Residues5
Detailsbinding site for residue MG A 517
ChainResidue
AALA270
AGLU419
AGLN420
AHOH712
AHOH741

site_idAD9
Number of Residues1
Detailsbinding site for residue MG A 518
ChainResidue
AASP411

site_idAE1
Number of Residues2
Detailsbinding site for residue MG A 519
ChainResidue
AARG189
AARG191

site_idAE2
Number of Residues5
Detailsbinding site for residue MG A 521
ChainResidue
AVAL87
AGLY88
AILE233
APHE236
APHE237

site_idAE3
Number of Residues10
Detailsbinding site for residue SO4 B 501
ChainResidue
BGLY162
BGLY164
BLYS165
BTHR166
BARG331
BHOH609
BHOH610
BHOH622
BHOH650
BHOH722

site_idAE4
Number of Residues2
Detailsbinding site for residue SO4 B 502
ChainResidue
BARG223
BARG253

site_idAE5
Number of Residues6
Detailsbinding site for residue SO4 B 503
ChainResidue
BASN332
BMG515
BHOH603
BHOH626
BSER330
BARG331

site_idAE6
Number of Residues5
Detailsbinding site for residue MG B 504
ChainResidue
BILE186
BASP249
BSER250
BARG253
BHOH635

site_idAE7
Number of Residues5
Detailsbinding site for residue MG B 505
ChainResidue
BGLY177
BALA178
BTYR181
BLYS205
BARG208

site_idAE8
Number of Residues3
Detailsbinding site for residue MG B 506
ChainResidue
BILE342
BSER344
BHOH620

site_idAE9
Number of Residues3
Detailsbinding site for residue MG B 507
ChainResidue
BMSE169
BASP249
BHOH784

site_idAF1
Number of Residues3
Detailsbinding site for residue MG B 508
ChainResidue
BHIS4
BMSE5
BASP120

site_idAF2
Number of Residues4
Detailsbinding site for residue MG B 509
ChainResidue
BARG117
BPRO118
BASN121
BHOH763

site_idAF3
Number of Residues3
Detailsbinding site for residue MG B 510
ChainResidue
AHOH658
BASP310
BARG320

site_idAF4
Number of Residues4
Detailsbinding site for residue MG B 511
ChainResidue
BGLU195
BASN332
BGLN335
BHOH649

site_idAF5
Number of Residues4
Detailsbinding site for residue MG B 512
ChainResidue
BTHR166
BASN170
BGLU195
BTHR196

site_idAF6
Number of Residues1
Detailsbinding site for residue MG B 513
ChainResidue
AGLN86

site_idAF7
Number of Residues3
Detailsbinding site for residue MG B 514
ChainResidue
BGLU174
BSER176
BLYS205

site_idAF8
Number of Residues3
Detailsbinding site for residue MG B 515
ChainResidue
BSER160
BARG331
BSO4503

site_idAF9
Number of Residues5
Detailsbinding site for residue MG B 516
ChainResidue
BMSE5
BHIS84
BTHR85
BLEU99
BGLY100

site_idAG1
Number of Residues1
Detailsbinding site for residue MG B 517
ChainResidue
BSER220

site_idAG2
Number of Residues2
Detailsbinding site for residue MG B 519
ChainResidue
BVAL221
BASN225

site_idAG3
Number of Residues3
Detailsbinding site for residue MG B 520
ChainResidue
AGLY100
BASP217
BHOH710

site_idAG4
Number of Residues3
Detailsbinding site for residue MG B 521
ChainResidue
BGLN86
BGLY100
BHOH668

site_idAG5
Number of Residues4
Detailsbinding site for residue MG B 522
ChainResidue
AGLU358
BGLU373
BLYS400
BHOH751

site_idAG6
Number of Residues3
Detailsbinding site for residue MG B 523
ChainResidue
BARG129
BGLY290
BHOH678

site_idAG7
Number of Residues4
Detailsbinding site for residue MG B 524
ChainResidue
BPHE279
BPRO283
BGLU318
BHOH748

site_idAG8
Number of Residues2
Detailsbinding site for residue MG B 525
ChainResidue
BVAL221
BASN225

Functional Information from PROSITE/UniProt
site_idPS00152
Number of Residues10
DetailsATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAIDSLKSIS
ChainResidueDetails
APRO340-SER349

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"30013545","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

250835

PDB entries from 2026-03-18

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