5YB6
L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-lysine complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0001716 | molecular_function | L-amino-acid oxidase activity |
A | 0004497 | molecular_function | monooxygenase activity |
A | 0009063 | biological_process | amino acid catabolic process |
A | 0009851 | biological_process | auxin biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
B | 0000166 | molecular_function | nucleotide binding |
B | 0001716 | molecular_function | L-amino-acid oxidase activity |
B | 0004497 | molecular_function | monooxygenase activity |
B | 0009063 | biological_process | amino acid catabolic process |
B | 0009851 | biological_process | auxin biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
C | 0000166 | molecular_function | nucleotide binding |
C | 0001716 | molecular_function | L-amino-acid oxidase activity |
C | 0004497 | molecular_function | monooxygenase activity |
C | 0009063 | biological_process | amino acid catabolic process |
C | 0009851 | biological_process | auxin biosynthetic process |
C | 0016491 | molecular_function | oxidoreductase activity |
D | 0000166 | molecular_function | nucleotide binding |
D | 0001716 | molecular_function | L-amino-acid oxidase activity |
D | 0004497 | molecular_function | monooxygenase activity |
D | 0009063 | biological_process | amino acid catabolic process |
D | 0009851 | biological_process | auxin biosynthetic process |
D | 0016491 | molecular_function | oxidoreductase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 40 |
Details | binding site for residue FAD A 601 |
Chain | Residue |
A | VAL51 |
A | ARG82 |
A | LEU83 |
A | GLY99 |
A | GLY100 |
A | MET101 |
A | ARG102 |
A | PHE103 |
A | VAL301 |
A | THR330 |
A | LEU335 |
A | GLY52 |
A | ILE340 |
A | SER363 |
A | TYR416 |
A | TRP463 |
A | HIS468 |
A | PHE469 |
A | ALA472 |
A | PHE473 |
A | GLY507 |
A | ASP508 |
A | GLY54 |
A | ALA515 |
A | TRP516 |
A | VAL517 |
A | ALA520 |
A | HOH724 |
A | HOH773 |
A | HOH811 |
A | HOH823 |
A | HOH853 |
A | HOH866 |
A | ILE55 |
A | HOH873 |
A | ALA56 |
A | GLU75 |
A | ALA76 |
A | LYS78 |
A | GLY81 |
site_id | AC2 |
Number of Residues | 10 |
Details | binding site for residue PG6 A 602 |
Chain | Residue |
A | LEU139 |
A | GLU140 |
A | GLN142 |
A | TYR144 |
A | GLN220 |
A | HOH716 |
A | HOH803 |
A | HOH903 |
C | LYS350 |
C | ASP560 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue LYS A 603 |
Chain | Residue |
A | ARG102 |
A | TRP235 |
A | ASP238 |
A | MET361 |
A | TYR416 |
A | TRP418 |
A | PHE473 |
A | ALA515 |
A | TRP516 |
A | HOH815 |
A | HOH820 |
A | HOH846 |
site_id | AC4 |
Number of Residues | 14 |
Details | binding site for residue LYS A 604 |
Chain | Residue |
A | THR337 |
A | GLN349 |
A | TRP352 |
A | ASP356 |
A | HOH735 |
A | HOH799 |
C | GLU140 |
C | GLY141 |
C | ASP393 |
C | ARG394 |
C | LEU395 |
C | HOH737 |
C | HOH809 |
C | HOH874 |
site_id | AC5 |
Number of Residues | 41 |
Details | binding site for residue FAD B 601 |
Chain | Residue |
B | HIS468 |
B | PHE469 |
B | ALA472 |
B | PHE473 |
B | GLY507 |
B | ASP508 |
B | ALA515 |
B | TRP516 |
B | VAL517 |
B | ALA520 |
B | LYS603 |
B | HOH749 |
B | HOH787 |
B | HOH813 |
B | HOH823 |
B | HOH829 |
B | HOH857 |
B | HOH877 |
B | VAL51 |
B | GLY52 |
B | GLY54 |
B | ILE55 |
B | ALA56 |
B | GLU75 |
B | ALA76 |
B | LYS78 |
B | GLY81 |
B | ARG82 |
B | LEU83 |
B | GLY99 |
B | GLY100 |
B | MET101 |
B | ARG102 |
B | PHE103 |
B | GLY300 |
B | VAL301 |
B | THR330 |
B | ILE340 |
B | SER363 |
B | TYR416 |
B | TRP463 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue PG6 B 602 |
Chain | Residue |
B | GLU140 |
B | GLN142 |
B | TYR144 |
B | GLN220 |
B | HOH863 |
B | HOH953 |
D | LYS350 |
D | ASP560 |
site_id | AC7 |
Number of Residues | 13 |
Details | binding site for residue LYS B 603 |
Chain | Residue |
B | ARG102 |
B | TRP235 |
B | ASP238 |
B | MET361 |
B | TYR416 |
B | TRP418 |
B | PHE473 |
B | ALA515 |
B | TRP516 |
B | FAD601 |
B | HOH735 |
B | HOH834 |
B | HOH898 |
site_id | AC8 |
Number of Residues | 14 |
Details | binding site for residue LYS B 604 |
Chain | Residue |
B | THR337 |
B | GLU344 |
B | GLN349 |
B | TRP352 |
B | ASP356 |
B | HOH724 |
B | HOH844 |
D | GLY141 |
D | ASP393 |
D | ARG394 |
D | LEU395 |
D | HOH790 |
D | HOH810 |
D | HOH862 |
site_id | AC9 |
Number of Residues | 37 |
Details | binding site for residue FAD C 601 |
Chain | Residue |
C | VAL51 |
C | GLY52 |
C | ILE55 |
C | ALA56 |
C | GLU75 |
C | ALA76 |
C | LYS78 |
C | GLY81 |
C | ARG82 |
C | LEU83 |
C | GLY99 |
C | GLY100 |
C | MET101 |
C | ARG102 |
C | PHE103 |
C | VAL301 |
C | THR330 |
C | CYS331 |
C | ILE340 |
C | SER363 |
C | TYR416 |
C | HIS468 |
C | PHE469 |
C | ALA472 |
C | PHE473 |
C | GLY507 |
C | ASP508 |
C | ALA515 |
C | TRP516 |
C | VAL517 |
C | ALA520 |
C | LYS603 |
C | HOH719 |
C | HOH744 |
C | HOH813 |
C | HOH836 |
C | HOH841 |
site_id | AD1 |
Number of Residues | 9 |
Details | binding site for residue PG6 C 602 |
Chain | Residue |
A | LYS350 |
A | ASP560 |
C | LEU139 |
C | GLU140 |
C | GLN142 |
C | TYR144 |
C | GLN220 |
C | HOH799 |
C | HOH887 |
site_id | AD2 |
Number of Residues | 10 |
Details | binding site for residue LYS C 603 |
Chain | Residue |
C | ARG102 |
C | ASP238 |
C | TYR416 |
C | TRP418 |
C | ALA515 |
C | TRP516 |
C | FAD601 |
C | HOH736 |
C | HOH832 |
C | HOH877 |
site_id | AD3 |
Number of Residues | 15 |
Details | binding site for residue LYS C 604 |
Chain | Residue |
A | GLU140 |
A | GLY141 |
A | ASP393 |
A | ARG394 |
A | LEU395 |
A | HOH705 |
A | HOH742 |
A | HOH806 |
C | THR337 |
C | GLN349 |
C | TRP352 |
C | ASP356 |
C | HOH730 |
C | HOH739 |
C | HOH891 |
site_id | AD4 |
Number of Residues | 37 |
Details | binding site for residue FAD D 601 |
Chain | Residue |
D | VAL51 |
D | GLY52 |
D | GLY54 |
D | ILE55 |
D | ALA56 |
D | GLU75 |
D | ALA76 |
D | LYS78 |
D | GLY81 |
D | ARG82 |
D | LEU83 |
D | GLY99 |
D | GLY100 |
D | MET101 |
D | ARG102 |
D | PHE103 |
D | VAL301 |
D | THR330 |
D | CYS331 |
D | ILE340 |
D | SER363 |
D | TYR416 |
D | HIS468 |
D | PHE469 |
D | ALA472 |
D | PHE473 |
D | GLY507 |
D | ASP508 |
D | ALA515 |
D | TRP516 |
D | VAL517 |
D | ALA520 |
D | LYS603 |
D | HOH703 |
D | HOH749 |
D | HOH836 |
D | HOH873 |
site_id | AD5 |
Number of Residues | 6 |
Details | binding site for residue PG6 D 602 |
Chain | Residue |
B | LYS350 |
B | ASP560 |
D | GLU140 |
D | GLN142 |
D | TYR144 |
D | GLN220 |
site_id | AD6 |
Number of Residues | 10 |
Details | binding site for residue LYS D 603 |
Chain | Residue |
D | ARG102 |
D | ASP238 |
D | TYR416 |
D | TRP418 |
D | PHE473 |
D | ALA515 |
D | TRP516 |
D | FAD601 |
D | HOH837 |
D | HOH902 |
site_id | AD7 |
Number of Residues | 16 |
Details | binding site for residue LYS D 604 |
Chain | Residue |
B | GLU140 |
B | GLY141 |
B | ASP393 |
B | ARG394 |
B | LEU395 |
B | HOH728 |
B | HOH741 |
B | HOH753 |
D | THR337 |
D | GLU344 |
D | GLN349 |
D | TRP352 |
D | ASP356 |
D | HOH728 |
D | HOH767 |
D | HOH925 |