Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Y6Q

Crystal structure of an aldehyde oxidase from Methylobacillus sp. KY4400

Functional Information from GO Data
ChainGOidnamespacecontents
A0016491molecular_functionoxidoreductase activity
A0016903molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors
A0046872molecular_functionmetal ion binding
A0051536molecular_functioniron-sulfur cluster binding
A0051537molecular_function2 iron, 2 sulfur cluster binding
B0000166molecular_functionnucleotide binding
B0016491molecular_functionoxidoreductase activity
B0046872molecular_functionmetal ion binding
B0050660molecular_functionflavin adenine dinucleotide binding
B0051536molecular_functioniron-sulfur cluster binding
B0051539molecular_function4 iron, 4 sulfur cluster binding
B0071949molecular_functionFAD binding
C0005506molecular_functioniron ion binding
C0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
Detailsbinding site for residue FES A 201
ChainResidue
AGLY42
ACYS43
AASP44
AGLY46
AGLN47
ACYS48
AGLY49
ACYS51
ACYS63

site_idAC2
Number of Residues8
Detailsbinding site for residue FES A 202
ChainResidue
AGLN102
ACYS103
AGLY104
ACYS106
ACYS138
AARG139
ACYS140
CMET210

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 203
ChainResidue
AGLU87
ALEU88
CARG44
CLYS427

site_idAC4
Number of Residues30
Detailsbinding site for residue FAD B 401
ChainResidue
AGLY46
BILE26
BALA28
BGLY29
BGLY30
BTHR31
BTHR32
BGLN33
BILE50
BALA97
BALA98
BILE102
BALA106
BTHR107
BGLY110
BASN111
BARG113
BGLN114
BARG115
BGLY164
BASP165
BILE213
BILE214
BLYS232
BTYR239
BGLU240
BPHE241
BSO4403
BHOH546
BHOH580

site_idAC5
Number of Residues9
Detailsbinding site for residue SF4 B 402
ChainResidue
BCYS118
BTYR121
BCYS130
BASN131
BCYS139
BSER157
BCYS158
BILE159
BALA160

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 B 403
ChainResidue
BGLN25
BARG113
BARG115
BFAD401

site_idAC7
Number of Residues4
Detailsbinding site for residue SO4 B 404
ChainResidue
BLEU59
BSER60
BPHE61
BHIS80

site_idAC8
Number of Residues1
Detailsbinding site for residue SO4 B 405
ChainResidue
BARG188

site_idAC9
Number of Residues6
Detailsbinding site for residue GOL B 406
ChainResidue
AHIS122
ATYR132
BSER75
BALA78
BASP79
BARG103

site_idAD1
Number of Residues4
Detailsbinding site for residue GOL B 407
ChainResidue
BASP235
BTYR310
CLEU771
CASP772

site_idAD2
Number of Residues10
Detailsbinding site for residue MOS C 801
ChainResidue
CGLN231
CGLY263
CTRP369
CMET370
CARG371
CPRO373
CGLY527
CGLY528
CGLU742
CMCN802

site_idAD3
Number of Residues33
Detailsbinding site for residue MCN C 802
ChainResidue
CTHR492
CGLY527
CGLY528
CSER529
CGLN530
CLEU531
CALA532
CARG665
CLEU666
CTYR667
CASN668
CLEU671
CALA672
CGLN675
CGLY737
CLYS738
CVAL740
CGLY741
CGLU742
CMOS801
CHOH948
CHOH988
CHOH1026
AGLN102
ACYS140
CGLY260
CGLY261
CPHE262
CGLY263
CILE488
CGLY489
CTHR490
CGLY491

site_idAD4
Number of Residues3
Detailsbinding site for residue SO4 C 803
ChainResidue
CARG464
CPRO628
CGLU629

site_idAD5
Number of Residues1
Detailsbinding site for residue SO4 C 804
ChainResidue
CARG442

site_idAD6
Number of Residues4
Detailsbinding site for residue SO4 C 805
ChainResidue
CTRP219
CGLU221
CGLY222
CHOH907

site_idAD7
Number of Residues4
Detailsbinding site for residue SO4 C 806
ChainResidue
CTHR722
CILE723
CASN724
CHOH912

site_idAD8
Number of Residues2
Detailsbinding site for residue SO4 C 807
ChainResidue
CHIS190
CARG195

site_idAD9
Number of Residues3
Detailsbinding site for residue SO4 C 808
ChainResidue
CHIS503
CASN540
CLYS544

site_idAE1
Number of Residues4
Detailsbinding site for residue SO4 C 809
ChainResidue
CARG549
CSER600
CVAL601
CLYS602

site_idAE2
Number of Residues2
Detailsbinding site for residue SO4 C 810
ChainResidue
CHIS57
CGLN58

site_idAE3
Number of Residues5
Detailsbinding site for residue GOL C 811
ChainResidue
CALA234
CGLN237
CTHR518
CLEU520
CARG620

site_idAE4
Number of Residues4
Detailsbinding site for residue GOL C 812
ChainResidue
CALA186
CARG325
CSER354
CGLN356

site_idAE5
Number of Residues5
Detailsbinding site for residue GOL C 813
ChainResidue
CPRO256
CTYR257
CTYR493
CGLU514
CLEU515

site_idAE6
Number of Residues5
Detailsbinding site for residue GOL C 814
ChainResidue
CLYS342
CARG346
CGLU375
CARG627
CHOH1103

site_idAE7
Number of Residues1
Detailsbinding site for residue IPA C 815
ChainResidue
BASN148

site_idAE8
Number of Residues3
Detailsbinding site for residue IPA C 816
ChainResidue
CGLY527
CGLY528
CMET625

Functional Information from PROSITE/UniProt
site_idPS00197
Number of Residues9
Details2FE2S_FER_1 2Fe-2S ferredoxin-type iron-sulfur binding region signature. CDQGQCGAC
ChainResidueDetails
ACYS43-CYS51

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon