5Y46

Crystal structure of a collagen-like peptide with interruption sequence

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue ZN A 101

Chain	Residue
A	GLY1
A	HOH207
A	HOH240
A	HOH242
B	HOH239

---

site_id	AC2
Number of Residues	3
Details	binding site for residue ACT B 101

Chain	Residue
B	GLY1
B	ZN102
C	GLY1

---

site_id	AC3
Number of Residues	3
Details	binding site for residue ZN B 102

Chain	Residue
B	ACT101
C	GLY1
B	GLY1

---

site_id	AC4
Number of Residues	9
Details	binding site for Di-peptide PRO B 2 and HYP B 3

Chain	Residue
A	HYP3
A	GLY4
B	GLY1
B	GLY4
B	HOH220
B	HOH227
B	HOH231
B	HOH232
C	PRO2

---

site_id	AC5
Number of Residues	11
Details	binding site for Di-peptide HYP B 3 and GLY B 4

Chain	Residue
A	GLY4
A	PRO5
B	PRO2
B	PRO5
B	HOH218
B	HOH220
B	HOH227
B	HOH231
B	HOH232
C	PRO2
C	GLY4

---

site_id	AC6
Number of Residues	11
Details	binding site for Di-peptide PRO B 5 and HYP B 6

Chain	Residue
A	HYP6
A	GLY7
B	GLY4
B	GLY7
B	HOH206
B	HOH208
B	HOH213
B	HOH234
C	GLY4
C	PRO5
C	HYP27

---

site_id	AC7
Number of Residues	12
Details	binding site for Di-peptide HYP B 6 and GLY B 7

Chain	Residue
A	GLY7
A	PRO8
B	PRO5
B	PRO8
B	HOH206
B	HOH207
B	HOH208
B	HOH213
B	HOH234
C	PRO5
C	GLY7
C	PRO8

---

site_id	AC8
Number of Residues	11
Details	binding site for Di-peptide PRO B 8 and HYP B 9

Chain	Residue
A	GLY7
A	HYP9
A	GLY10
B	GLY7
B	GLY10
B	HOH221
B	HOH224
B	HOH225
C	HYP3
C	GLY7
C	PRO8

---

site_id	AC9
Number of Residues	10
Details	binding site for Di-peptide HYP B 9 and GLY B 10

Chain	Residue
A	GLY10
B	PRO8
B	PRO11
B	HOH210
B	HOH221
B	HOH224
B	HOH225
C	HYP3
C	PRO8
C	GLY10

---

site_id	AD1
Number of Residues	11
Details	binding site for Di-peptide PRO B 11 and HYP B 12

Chain	Residue
A	GLY10
A	HYP12
A	ALA13
B	GLY10
B	ALA13
B	HOH203
B	HOH210
B	HOH214
B	HOH236
C	GLY10
C	PRO11

---

site_id	AD2
Number of Residues	11
Details	binding site for Di-peptide PRO B 11 and HYP B 12

Chain	Residue
A	GLY10
A	HYP12
A	ALA13
B	GLY10
B	ALA13
B	HOH203
B	HOH210
B	HOH214
B	HOH236
C	GLY10
C	PRO11

---

site_id	AD3
Number of Residues	13
Details	binding site for Di-peptide HYP B 12 and ALA B 13

Chain	Residue
B	PRO11
B	LEU14
B	HYP15
B	HOH203
B	HOH210
B	HOH214
B	HOH222
B	HOH228
B	HOH236
C	PRO11
C	HOH126
A	ALA13
A	LEU14

---

site_id	AD4
Number of Residues	13
Details	binding site for Di-peptide HYP B 12 and ALA B 13

Chain	Residue
A	ALA13
A	LEU14
B	PRO11
B	LEU14
B	HYP15
B	HOH203
B	HOH210
B	HOH214
B	HOH222
B	HOH228
B	HOH236
C	PRO11
C	HOH126

---

site_id	AD5
Number of Residues	11
Details	binding site for Di-peptide LEU B 14 and HYP B 15

Chain	Residue
A	HYP15
A	GLY16
A	HOH206
B	ALA13
B	GLY16
B	HOH217
B	HOH222
B	HOH229
B	HOH237
C	ALA13
C	LEU14

---

site_id	AD6
Number of Residues	12
Details	binding site for Di-peptide HYP B 15 and GLY B 16

Chain	Residue
A	GLY16
A	PRO17
B	ALA13
B	LEU14
B	PRO17
B	HOH209
B	HOH217
B	HOH222
B	HOH229
B	HOH237
C	LEU14
C	GLY16

---

site_id	AD7
Number of Residues	10
Details	binding site for Di-peptide PRO B 17 and HYP B 18

Chain	Residue
A	HYP18
A	GLY19
A	HYP24
B	GLY16
B	GLY19
B	HOH230
B	HOH238
C	GLY16
C	PRO17
C	HOH116

---

site_id	AD8
Number of Residues	11
Details	binding site for Di-peptide HYP B 18 and GLY B 19

Chain	Residue
A	GLY19
A	PRO20
B	PRO17
B	PRO20
B	HOH212
B	HOH230
B	HOH238
C	PRO17
C	GLY19
C	PRO20
C	HOH116

---

site_id	AD9
Number of Residues	11
Details	binding site for Di-peptide PRO B 20 and HYP B 21

Chain	Residue
A	GLY19
A	HYP21
A	GLY22
A	HOH215
B	GLY19
B	GLY22
B	PRO26
B	HOH212
B	HOH226
C	GLY19
C	PRO20

---

site_id	AE1
Number of Residues	11
Details	binding site for Di-peptide HYP B 21 and GLY B 22

Chain	Residue
A	GLY22
A	PRO23
A	HOH215
B	PRO20
B	PRO23
B	PRO26
B	HOH212
B	HOH216
B	HOH226
C	PRO20
C	GLY22

---

site_id	AE2
Number of Residues	11
Details	binding site for Di-peptide PRO B 23 and HYP B 24

Chain	Residue
A	HYP24
A	GLY25
B	GLY22
B	GLY25
B	HOH201
B	HOH202
B	HOH211
B	HOH219
B	HOH233
C	GLY22
C	PRO23

---

site_id	AE3
Number of Residues	12
Details	binding site for Di-peptide HYP B 24 and GLY B 25

Chain	Residue
A	GLY25
A	PRO26
B	PRO23
B	PRO26
B	HOH201
B	HOH202
B	HOH204
B	HOH211
B	HOH219
B	HOH233
C	PRO23
C	GLY25

---

site_id	AE4
Number of Residues	8
Details	binding site for Di-peptide PRO B 26 and HYP B 27

Chain	Residue
A	HYP27
B	HYP21
B	GLY25
B	HOH205
B	HOH215
B	HOH223
B	HOH240
C	PRO26

---

site_id	AE5
Number of Residues	11
Details	binding site for Di-peptide PRO C 2 and HYP C 3

Chain	Residue
A	GLY4
A	PRO5
B	HYP3
B	GLY4
B	HYP9
C	GLY1
C	GLY4
C	PRO8
C	HOH110
C	HOH136
C	HOH137

---

site_id	AE6
Number of Residues	12
Details	binding site for Di-peptide HYP C 3 and GLY C 4

Chain	Residue
A	PRO5
A	GLY7
B	GLY4
B	PRO5
B	HYP9
C	PRO2
C	PRO5
C	PRO8
C	HOH110
C	HOH125
C	HOH136
C	HOH137

---

site_id	AE7
Number of Residues	10
Details	binding site for Di-peptide PRO C 5 and HYP C 6

Chain	Residue
A	GLY7
A	PRO8
B	HYP6
B	GLY7
C	GLY4
C	GLY7
C	HOH104
C	HOH107
C	HOH119
C	HOH121

---

site_id	AE8
Number of Residues	13
Details	binding site for Di-peptide HYP C 6 and GLY C 7

Chain	Residue
A	PRO8
A	GLY10
A	PRO11
B	GLY7
B	PRO8
C	PRO5
C	PRO8
C	HYP9
C	HOH104
C	HOH107
C	HOH119
C	HOH121
C	HOH133

---

site_id	AE9
Number of Residues	12
Details	binding site for Di-peptide PRO C 8 and HYP C 9

Chain	Residue
A	GLY10
A	PRO11
B	GLY7
B	HYP9
B	GLY10
C	HYP3
C	GLY7
C	GLY10
C	HOH103
C	HOH105
C	HOH130
C	HOH132

---

site_id	AF1
Number of Residues	12
Details	binding site for Di-peptide HYP C 9 and GLY C 10

Chain	Residue
A	PRO11
B	GLY10
B	PRO11
C	GLY7
C	PRO8
C	PRO11
C	HOH103
C	HOH105
C	HOH124
C	HOH128
C	HOH130
C	HOH132

---

site_id	AF2
Number of Residues	7
Details	binding site for Di-peptide PRO C 11 and HYP C 12

Chain	Residue
A	ALA13
B	HYP12
C	GLY10
C	ALA13
C	HOH114
C	HOH115
C	HOH126

---

site_id	AF3
Number of Residues	9
Details	binding site for Di-peptide HYP C 12 and ALA C 13

Chain	Residue
A	LEU14
A	GLY16
A	HOH209
B	LEU14
C	PRO11
C	LEU14
C	HOH113
C	HOH114
C	HOH115

---

site_id	AF4
Number of Residues	13
Details	binding site for Di-peptide LEU C 14 and HYP C 15

Chain	Residue
A	HYP12
A	GLY16
A	PRO17
B	HYP15
B	GLY16
B	HOH222
C	ALA13
C	GLY16
C	HOH102
C	HOH111
C	HOH127
C	HOH134
C	HOH141

---

site_id	AF5
Number of Residues	13
Details	binding site for Di-peptide LEU C 14 and HYP C 15

Chain	Residue
A	HYP12
A	GLY16
A	PRO17
B	HYP15
B	GLY16
B	HOH222
C	ALA13
C	GLY16
C	HOH102
C	HOH111
C	HOH127
C	HOH134
C	HOH141

---

site_id	AF6
Number of Residues	12
Details	binding site for Di-peptide HYP C 15 and GLY C 16

Chain	Residue
A	PRO17
A	GLY19
A	PRO20
B	GLY16
B	PRO17
C	LEU14
C	PRO17
C	HOH102
C	HOH111
C	HOH118
C	HOH127
C	HOH134

---

site_id	AF7
Number of Residues	10
Details	binding site for Di-peptide PRO C 17 and HYP C 18

Chain	Residue
A	GLY19
A	PRO20
A	HOH213
B	HYP18
B	GLY19
C	GLY16
C	GLY19
C	HOH116
C	HOH117
C	HOH129

---

site_id	AF8
Number of Residues	11
Details	binding site for Di-peptide HYP C 18 and GLY C 19

Chain	Residue
A	PRO20
A	GLY22
A	HOH213
B	GLY19
B	PRO20
C	PRO17
C	PRO20
C	HYP21
C	HOH116
C	HOH117
C	HOH129

---

site_id	AF9
Number of Residues	9
Details	binding site for Di-peptide PRO C 20 and HYP C 21

Chain	Residue
A	GLY22
A	PRO23
B	GLY19
B	HYP21
B	GLY22
C	GLY19
C	GLY22
C	HOH108
C	HOH120

---

site_id	AG1
Number of Residues	11
Details	binding site for Di-peptide HYP C 21 and GLY C 22

Chain	Residue
A	PRO23
A	GLY25
A	PRO26
B	GLY22
B	PRO23
C	GLY19
C	PRO20
C	PRO23
C	HOH108
C	HOH120
C	HOH131

---

site_id	AG2
Number of Residues	11
Details	binding site for Di-peptide PRO C 23 and HYP C 24

Chain	Residue
A	HYP3
A	GLY25
A	PRO26
B	HYP24
B	GLY25
C	GLY22
C	GLY25
C	HOH109
C	HOH112
C	HOH122
C	HOH123

---

site_id	AG3
Number of Residues	11
Details	binding site for Di-peptide HYP C 24 and GLY C 25

Chain	Residue
A	PRO26
A	HOH221
B	GLY25
C	PRO23
C	PRO26
C	HYP27
C	HOH106
C	HOH109
C	HOH112
C	HOH122
C	HOH123

---

site_id	AG4
Number of Residues	5
Details	binding site for Di-peptide PRO C 26 and HYP C 27

Chain	Residue
B	PRO5
B	PRO26
C	GLY25
C	HOH101
C	HOH135

---