5XUX
Crystal structure of Rib7 from Methanosarcina mazei
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
A | 0009231 | biological_process | riboflavin biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0050661 | molecular_function | NADP binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
B | 0009231 | biological_process | riboflavin biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0050661 | molecular_function | NADP binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
C | 0009231 | biological_process | riboflavin biosynthetic process |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0050661 | molecular_function | NADP binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
D | 0009231 | biological_process | riboflavin biosynthetic process |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0050661 | molecular_function | NADP binding |
E | 0000166 | molecular_function | nucleotide binding |
E | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
E | 0009231 | biological_process | riboflavin biosynthetic process |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0050661 | molecular_function | NADP binding |
F | 0000166 | molecular_function | nucleotide binding |
F | 0008703 | molecular_function | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
F | 0009231 | biological_process | riboflavin biosynthetic process |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0050661 | molecular_function | NADP binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | binding site for residue NAP A 301 |
Chain | Residue |
A | SER10 |
A | ASP57 |
A | VAL86 |
A | ASP87 |
A | SER88 |
A | ARG91 |
A | ALA133 |
A | PHE134 |
A | VAL136 |
A | LEU138 |
A | GLU156 |
A | ALA11 |
A | GLY157 |
A | GLY158 |
A | ALA159 |
A | THR160 |
A | LEU161 |
A | SER19 |
A | ARG23 |
A | GLN25 |
A | GLY50 |
A | ILE51 |
A | GLY52 |
A | THR53 |
site_id | AC2 |
Number of Residues | 28 |
Details | binding site for residue NAP B 301 |
Chain | Residue |
A | HIS-6 |
A | HIS-3 |
A | MET1 |
B | SER10 |
B | ALA11 |
B | LEU18 |
B | SER19 |
B | ARG23 |
B | GLY50 |
B | ILE51 |
B | GLY52 |
B | THR53 |
B | ASP57 |
B | VAL86 |
B | SER88 |
B | ARG135 |
B | VAL136 |
B | LEU138 |
B | GLU156 |
B | GLY158 |
B | ALA159 |
B | THR160 |
B | LEU161 |
B | HOH401 |
B | HOH406 |
B | HOH434 |
B | HOH459 |
B | HOH461 |
site_id | AC3 |
Number of Residues | 23 |
Details | binding site for residue NAP C 301 |
Chain | Residue |
C | SER10 |
C | ALA11 |
C | LEU18 |
C | SER19 |
C | ARG23 |
C | GLY50 |
C | ILE51 |
C | GLY52 |
C | THR53 |
C | ASP57 |
C | VAL86 |
C | SER88 |
C | ARG91 |
C | ARG135 |
C | VAL136 |
C | LEU138 |
C | GLU156 |
C | GLY157 |
C | GLY158 |
C | ALA159 |
C | THR160 |
C | LEU161 |
C | GLY164 |
site_id | AC4 |
Number of Residues | 23 |
Details | binding site for residue NAP D 301 |
Chain | Residue |
D | SER10 |
D | ALA11 |
D | LEU18 |
D | SER19 |
D | ARG23 |
D | GLN25 |
D | GLY50 |
D | ILE51 |
D | GLY52 |
D | THR53 |
D | ASP57 |
D | VAL86 |
D | SER88 |
D | ARG91 |
D | ARG135 |
D | VAL136 |
D | LEU138 |
D | GLY157 |
D | GLY158 |
D | ALA159 |
D | THR160 |
D | LEU161 |
D | GLY164 |
site_id | AC5 |
Number of Residues | 28 |
Details | binding site for residue NAP E 301 |
Chain | Residue |
E | ALA11 |
E | LEU18 |
E | SER19 |
E | ARG23 |
E | GLY50 |
E | ILE51 |
E | GLY52 |
E | THR53 |
E | ASP57 |
E | VAL86 |
E | SER88 |
E | ARG135 |
E | VAL136 |
E | LEU138 |
E | GLU156 |
E | GLY157 |
E | GLY158 |
E | ALA159 |
E | THR160 |
E | LEU161 |
E | HOH402 |
E | HOH404 |
E | HOH449 |
E | HOH460 |
F | HIS-3 |
F | HIS-6 |
F | MET1 |
E | SER10 |
site_id | AC6 |
Number of Residues | 26 |
Details | binding site for residue NAP F 301 |
Chain | Residue |
F | SER10 |
F | ALA11 |
F | LEU18 |
F | SER19 |
F | ARG23 |
F | GLY50 |
F | ILE51 |
F | GLY52 |
F | THR53 |
F | ASP57 |
F | VAL86 |
F | ASP87 |
F | SER88 |
F | ARG91 |
F | ALA133 |
F | PHE134 |
F | VAL136 |
F | LEU138 |
F | GLU156 |
F | GLY157 |
F | GLY158 |
F | ALA159 |
F | THR160 |
F | LEU161 |
F | PRO189 |
F | HOH412 |