5XND
Solution structure of the major fish allergen parvalbumin Sco j 1 derived from the Pacific mackerel
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue CA A 201 |
| Chain | Residue |
| A | ASP52 |
| A | ASP54 |
| A | SER56 |
| A | PHE58 |
| A | GLU63 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue CA A 202 |
| Chain | Residue |
| A | GLU102 |
| A | ASP91 |
| A | ASP93 |
| A | ASP95 |
| A | LYS97 |
Functional Information from PROSITE/UniProt
| site_id | PS00018 |
| Number of Residues | 13 |
| Details | EF_HAND_1 EF-hand calcium-binding domain. DQDKSGFIEeeEL |
| Chain | Residue | Details |
| A | ASP52-LEU64 | |
| A | ASP91-PHE103 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 35 |
| Details | Domain: {"description":"EF-hand 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 31 |
| Details | Domain: {"description":"EF-hand 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 19 |
| Details | Region: {"description":"IgE-binding","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"2008","firstPage":"857","lastPage":"861","volume":"111","journal":"Food Chem.","title":"Elucidation of a major IgE epitope of Pacific mackerel parvalbumin.","authors":["Yoshida S.","Ichimura A.","Shiomi K."],"citationCrossReferences":[{"database":"DOI","id":"10.1016/j.foodchem.2008.04.062"}]}}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00448","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"29215073","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5XND","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"29215073","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5XND","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q90YK9","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N-acetylalanine","evidences":[{"source":"UniProtKB","id":"P02621","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
